Difference between revisions of "PRASCSi CUT"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FACOAL180 FACOAL180] == * direction: ** REVERSIBLE * common name: ** Fatty acid CoA ligase octade...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PRASCSi_CUT PRASCSi_CUT] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/FACOAL180 FACOAL180] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/PRASCSi_CUT PRASCSi_CUT] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
* common name:
 
** Fatty acid  CoA ligase  octadecanoate
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[atp]][c] '''+''' 1.0 [[coa]][c] '''+''' 1.0 [[ocdca]][c] '''<=>''' 1.0 [[amp]][c] '''+''' 1.0 [[stcoa]][c] '''+''' 1.0 [[ppi]][c]
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** 1.0 [[atp]][c] '''+''' 1.0 [[5aizc]][c] '''+''' 1.0 [[asp__L]][c] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[25aics]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Coenzyme A[c] '''+''' 1.0 Octadecanoate (n-C18:0)[c] '''<=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 Stearoyl-CoA (n-C18:0CoA)[c] '''+''' 1.0 Diphosphate[c]
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** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate[c] '''+''' 1.0 L-Aspartate[c] '''<=>''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 (S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS22560]]
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* Gene: [[B471_RS0105280]]
** [[pantograph]]-[[cljungdahlii]]
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** Source: [[manual-missing_rxn_creator]]
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''471''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
 
** '''54''' reactions found over '''160''' reactions in the full pathway
 
* [[map00071]]: [http://www.genome.jp/dbget-bin/www_bget?map00071 map00071]
 
** '''17''' reactions found over '''167''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
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* Category: [[manual]]
** Source: [[orthology-cljungdahlii]]
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** Source: [[manual-missing_rxn_creator]]
*** Tool: [[pantograph]]
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*** Comment: [[reaction found from orthology but we fixed reversibility based on biological expertise]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33615 33615]
 
* MetaNetX (MNX) Equation : MNXR99164
 
* EC Number : 6.2.1.3
 
* BioCyc : META:RXN-16380
 
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
{{#set: common name=Fatty acid  CoA ligase  octadecanoate }}
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{{#set: gene associated=B471_RS0105280}}
{{#set: gene associated=B471_RS22560}}
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{{#set: in pathway=}}
{{#set: in pathway=map01100|map00061|map00071}}
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{{#set: reconstruction category=manual}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=manual-missing_rxn_creator}}
{{#set: reconstruction source=orthology-cljungdahlii}}
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{{#set: reconstruction comment=reaction found from orthology but we fixed reversibility based on biological expertise}}
{{#set: reconstruction tool=pantograph}}
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Latest revision as of 15:36, 21 March 2018

Reaction PRASCSi_CUT

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate[c] + 1.0 L-Aspartate[c] <=> 1.0 H+[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 Phosphate[c] + 1.0 (S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links