Difference between revisions of "PRATPP"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPCDC PPCDC] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphopantothenoylcysteine decarbo...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PRATPP PRATPP] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoribosyl-ATP pyrophosphatas...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPCDC PPCDC] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PRATPP PRATPP] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Phosphopantothenoylcysteine decarboxylase
+
** Phosphoribosyl-ATP pyrophosphatase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[4ppcys]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[pan4p]][c] '''+''' 1.0 [[co2]][c]
+
** 1.0 [[prbatp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[prbamp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 N-((R)-4-Phosphopantothenoyl)-L-cysteine[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Pantetheine 4'-phosphate[c] '''+''' 1.0 CO2 CO2[c]
+
** 1.0 1-(5-Phosphoribosyl)-ATP[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 1-(5-Phosphoribosyl)-AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[B471_RS0109325]]
 
−
** [[pantograph]]-[[cljungdahlii]]
 
−
** [[pantograph]]-[[bsubtilis]]
 
−
** [[pantograph]]-[[aferrooxidans]]
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''471''' reactions found over '''2349''' reactions in the full pathway
 
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00770]]: [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770]
+
* [[map00340]]: [http://www.genome.jp/dbget-bin/www_bget?map00340 map00340]
−
** '''20''' reactions found over '''75''' reactions in the full pathway
+
** '''13''' reactions found over '''90''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[manual]]
−
** Source: [[orthology-cljungdahlii]]
+
** Source: [[manual-reaction_to_add_delete]]
−
*** Tool: [[pantograph]]
+
*** Comment: [[reaction added from literature evidence or biological expertise]]
−
** Source: [[orthology-bsubtilis]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-aferrooxidans]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* EC Number : 4.1.1.36
 
−
* BioCyc : META:P-PANTOCYSDECARB-RXN
 
−
* MetaNetX (MNX) Equation : MNXR103098
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16793 16793]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22828 22828]
−
* Reactome : REACT_R-ATH-196840
+
* BioCyc : META:HISTPRATPHYD-RXN
−
* KEGG Reaction : R03269
+
* MetaNetX (MNX) Equation : MNXR103155
 +
* KEGG Reaction : R04035
 +
* EC Number : 3.6.1.31
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Phosphopantothenoylcysteine decarboxylase}}
+
{{#set: common name=Phosphoribosyl-ATP pyrophosphatase}}
−
{{#set: gene associated=B471_RS0109325}}
+
{{#set: in pathway=map01100|map00340|map01110|map01230}}
−
{{#set: in pathway=map01100|map00770}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=manual-reaction_to_add_delete}}
−
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
+
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 15:36, 21 March 2018

Reaction PRATPP

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphoribosyl-ATP pyrophosphatase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 1-(5-Phosphoribosyl)-ATP[c] + 1.0 H2O H2O[c] => 1.0 Diphosphate[c] + 1.0 H+[c] + 1.0 1-(5-Phosphoribosyl)-AMP[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:HISTPRATPHYD-RXN
  • MetaNetX (MNX) Equation : MNXR103155
  • KEGG Reaction : R04035
  • EC Number : 3.6.1.31




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