Difference between revisions of "HSK"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GPDDA2 GPDDA2] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycerophosphodiester phosphodies...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HSK HSK] == * direction: ** LEFT-TO-RIGHT * common name: ** Homoserine kinase * Synonym(s): == Rea...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/GPDDA2 GPDDA2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/HSK HSK] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine)
+
** Homoserine kinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h2o]][c] '''+''' 1.0 [[g3pe]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[glyc3p]][c] '''+''' 1.0 [[etha]][c]
+
** 1.0 [[hom__L]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[phom]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H2O H2O[c] '''+''' 1.0 Sn-Glycero-3-phosphoethanolamine[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Glycerol 3-phosphate[c] '''+''' 1.0 Ethanolamine[c]
+
** 1.0 L-Homoserine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 O-Phospho-L-homoserine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS24705]]
+
* Gene: [[B471_RS0109990]]
** [[pantograph]]-[[cljungdahlii]]
+
** Source: [[orthology-cljungdahlii]]
** [[pantograph]]-[[bsubtilis]]
+
** Source: [[orthology-bsubtilis]]
 
== Pathways  ==
 
== Pathways  ==
* [[map00564]]: [http://www.genome.jp/dbget-bin/www_bget?map00564 map00564]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
** '''36''' reactions found over '''134''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
 +
** '''24''' reactions found over '''133''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''101''' reactions found over '''715''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29319 29319]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13985 13985]
* EC Number : 3.1.4.2
+
* EC Number : 2.7.1.39
* MetaNetX (MNX) Equation : MNXR100411
+
* MetaNetX (MNX) Equation : MNXR100737
* KEGG Reaction : R01470
+
* KEGG Reaction : R01771
* BioCyc : META:RXN-14160
+
* BioCyc : META:HOMOSERKIN-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine)}}
+
{{#set: common name=Homoserine kinase}}
{{#set: gene associated=B471_RS24705}}
+
{{#set: gene associated=B471_RS0109990}}
{{#set: in pathway=map00564}}
+
{{#set: in pathway=map01100|map01110|map00260|map01230|map01120}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
 
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:37, 21 March 2018

Reaction HSK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Homoserine kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Homoserine[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 H+[c] + 1.0 O-Phospho-L-homoserine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.7.1.39
  • MetaNetX (MNX) Equation : MNXR100737
  • KEGG Reaction : R01771
  • BioCyc : META:HOMOSERKIN-RXN