Difference between revisions of "PPND"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PGCD PGCD] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoglycerate dehydrogenase * Syno...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPND PPND] == * direction: ** LEFT-TO-RIGHT * common name: ** Prephenate dehydrogenase * Synonym(s)...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PGCD PGCD] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPND PPND] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Phosphoglycerate dehydrogenase
+
** Prephenate dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[nad]][c] '''+''' 1.0 [[3pg]][c] '''=>''' 1.0 [[3php]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[pphn]][c] '''+''' 1.0 [[nad]][c] '''=>''' 1.0 [[34hpp]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[co2]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 3-Phospho-D-glycerate[c] '''=>''' 1.0 3-Phosphohydroxypyruvate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 H+[c]
+
** 1.0 Prephenate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''=>''' 1.0 3-(4-Hydroxyphenyl)pyruvate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 CO2 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0105500]]
+
* Gene: [[B471_RS0109440]]
−
** [[pantograph]]-[[cljungdahlii]]
+
** Source: [[orthology-cljungdahlii]]
−
** [[pantograph]]-[[bsubtilis]]
+
** Source: [[orthology-bsubtilis]]
−
** [[pantograph]]-[[aferrooxidans]]
+
** Source: [[orthology-aferrooxidans]]
−
* [[B471_RS0108770]]
+
−
** [[pantograph]]-[[cljungdahlii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''471''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''101''' reactions found over '''715''' reactions in the full pathway
 
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
−
** '''51''' reactions found over '''220''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''78''' reactions found over '''228''' reactions in the full pathway
 
−
* [[map00680]]: [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680]
 
−
** '''14''' reactions found over '''75''' reactions in the full pathway
 
−
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
 
−
** '''24''' reactions found over '''133''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''148''' reactions found over '''694''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 45: Line 29:
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* EC Number : 1.1.1.95
 
−
* BioCyc : META:PGLYCDEHYDROG-RXN
 
−
* MetaNetX (MNX) Equation : MNXR102527
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12641 12641]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13869 13869]
−
* Reactome : REACT_R-ATH-977348
+
* EC Number : 1.3.1.12
−
* KEGG Reaction : R01513
+
* MetaNetX (MNX) Equation : MNXR103121
 +
* KEGG Reaction : R01728
 +
* BioCyc : META:PREPHENATEDEHYDROG-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Phosphoglycerate dehydrogenase}}
+
{{#set: common name=Prephenate dehydrogenase}}
−
{{#set: gene associated=B471_RS0105500|B471_RS0108770}}
+
{{#set: gene associated=B471_RS0109440}}
−
{{#set: in pathway=map01100|map01120|map01200|map01230|map00680|map00260|map01130}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:37, 21 March 2018

Reaction PPND

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Prephenate dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Prephenate[c] + 1.0 Nicotinamide adenine dinucleotide[c] => 1.0 3-(4-Hydroxyphenyl)pyruvate[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 CO2 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 1.3.1.12
  • MetaNetX (MNX) Equation : MNXR103121
  • KEGG Reaction : R01728
  • BioCyc : META:PREPHENATEDEHYDROG-RXN




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