Difference between revisions of "GLUR"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00780 map00780] == * common_name: ** Biotin metabolism * Synonym(s): == Reaction(s) found == '''2...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLUR GLUR] == * direction: ** REVERSIBLE * common name: ** Glutamate racemase * Synonym(s): == Rea...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00780 map00780] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/GLUR GLUR] ==
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* common_name:
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* direction:
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** Biotin metabolism
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** REVERSIBLE
 +
* common name:
 +
** Glutamate racemase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''28''' reactions found over '''67''' reactions in the full pathway
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* With identifiers:
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* [[3HAD100]]
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** 1.0 [[glu__D]][c] '''<=>''' 1.0 [[glu__L]][c]
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** 0 associated gene:
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* With common name(s):
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** 1 reconstruction source(s) associated:
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** 1.0 D-Glutamate[c] '''<=>''' 1.0 L-Glutamate[c]
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*** [[manual-reaction_to_add_delete]]
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* [[3HAD120]]
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== Genes associated with this reaction  ==
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** 0 associated gene:
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* Gene: [[B471_RS0110265]]
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*** [[manual-reaction_to_add_delete]]
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** Source: [[orthology-cljungdahlii]]
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* [[3HAD140]]
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** Source: [[orthology-bsubtilis]]
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** 0 associated gene:
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** Source: [[orthology-aferrooxidans]]
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[manual-reaction_to_add_delete]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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* [[3HAD160]]
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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** 0 associated gene:
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* [[map00471]]: [http://www.genome.jp/dbget-bin/www_bget?map00471 map00471]
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** 1 reconstruction source(s) associated:
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** '''3''' reactions found over '''10''' reactions in the full pathway
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*** [[manual-reaction_to_add_delete]]
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== Reconstruction information  ==
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* [[3HAD60]]
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* Category: [[orthology]]
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** 0 associated gene:
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** Source: [[orthology-cljungdahlii]]
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** 1 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[manual-reaction_to_add_delete]]
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** Source: [[orthology-bsubtilis]]
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* [[3HAD80]]
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*** Tool: [[pantograph]]
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** 0 associated gene:
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** Source: [[orthology-aferrooxidans]]
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** 1 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[manual-reaction_to_add_delete]]
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* [[3OAR121]]
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** 1 associated gene(s):
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*** [[B471_RS0109640]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[3OAR141]]
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** 1 associated gene(s):
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*** [[B471_RS0109640]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[3OAR161]]
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** 1 associated gene(s):
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*** [[B471_RS0109640]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[3OAR180]]
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** 1 associated gene(s):
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*** [[B471_RS0109640]]
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** 1 reconstruction source(s) associated:
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−
*** [[orthology-cljungdahlii]]
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* [[3OAR181]]
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** 1 associated gene(s):
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*** [[B471_RS0109640]]
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** 1 reconstruction source(s) associated:
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−
*** [[orthology-cljungdahlii]]
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* [[3OAR40]]
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** 1 associated gene(s):
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*** [[B471_RS0109640]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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−
* [[3OAS121]]
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** 1 associated gene(s):
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*** [[B471_RS0109650]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[3OAS141]]
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** 1 associated gene(s):
+
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*** [[B471_RS0109650]]
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** 1 reconstruction source(s) associated:
+
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*** [[orthology-cljungdahlii]]
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* [[3OAS161]]
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** 1 associated gene(s):
+
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*** [[B471_RS0109650]]
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−
** 1 reconstruction source(s) associated:
+
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*** [[orthology-cljungdahlii]]
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* [[3OAS180]]
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** 1 associated gene(s):
+
−
*** [[B471_RS0109650]]
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** 1 reconstruction source(s) associated:
+
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*** [[orthology-cljungdahlii]]
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* [[3OAS181]]
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** 1 associated gene(s):
+
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*** [[B471_RS0109650]]
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** 1 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
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* [[AMAOTr]]
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** 1 associated gene(s):
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*** [[B471_RS0107920]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[AOXSr2]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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* [[BACCL]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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* [[BTS4]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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* [[CHCOAL]]
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** 1 associated gene(s):
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*** [[B471_RS22405]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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* [[DBTS]]
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** 1 associated gene(s):
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*** [[B471_RS21545]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[EAR121y]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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−
*** [[manual-reaction_to_add_delete]]
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* [[EAR141y]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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* [[EAR161y]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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* [[EAR180y]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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−
*** [[manual-reaction_to_add_delete]]
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* [[EAR181y]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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−
*** [[manual-reaction_to_add_delete]]
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−
== Reaction(s) not found ==
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−
* [http://bigg.ucsd.edu/universal/reactions/3HAD100_1 3HAD100_1]
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−
* [http://bigg.ucsd.edu/universal/reactions/3HAD120_1 3HAD120_1]
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* [http://bigg.ucsd.edu/universal/reactions/3HAD140_1 3HAD140_1]
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* [http://bigg.ucsd.edu/universal/reactions/3HAD160_1 3HAD160_1]
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* [http://bigg.ucsd.edu/universal/reactions/3HAD40_1 3HAD40_1]
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* [http://bigg.ucsd.edu/universal/reactions/3HAD60_1 3HAD60_1]
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* [http://bigg.ucsd.edu/universal/reactions/3HAD80_1 3HAD80_1]
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* [http://bigg.ucsd.edu/universal/reactions/3OAR180_1 3OAR180_1]
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* [http://bigg.ucsd.edu/universal/reactions/3OAR181_1 3OAR181_1]
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* [http://bigg.ucsd.edu/universal/reactions/3OAS180_1 3OAS180_1]
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* [http://bigg.ucsd.edu/universal/reactions/3OAS181_1 3OAS181_1]
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* [http://bigg.ucsd.edu/universal/reactions/AOXSr AOXSr]
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* [http://bigg.ucsd.edu/universal/reactions/BACCLm BACCLm]
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* [http://bigg.ucsd.edu/universal/reactions/BSORy BSORy]
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* [http://bigg.ucsd.edu/universal/reactions/BTND1 BTND1]
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* [http://bigg.ucsd.edu/universal/reactions/BTND1n BTND1n]
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* [http://bigg.ucsd.edu/universal/reactions/BTNDe BTNDe]
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* [http://bigg.ucsd.edu/universal/reactions/BTNDm BTNDm]
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* [http://bigg.ucsd.edu/universal/reactions/BTS3r BTS3r]
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* [http://bigg.ucsd.edu/universal/reactions/BTSr BTSr]
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−
* [http://bigg.ucsd.edu/universal/reactions/EAR160y EAR160y]
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* [http://bigg.ucsd.edu/universal/reactions/EAR160y_1 EAR160y_1]
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* [http://bigg.ucsd.edu/universal/reactions/EAR181y_1 EAR181y_1]
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−
* [http://bigg.ucsd.edu/universal/reactions/EGMEACPR EGMEACPR]
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* [http://bigg.ucsd.edu/universal/reactions/EPMEACPR EPMEACPR]
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* [http://bigg.ucsd.edu/universal/reactions/KAS1 KAS1]
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* [http://bigg.ucsd.edu/universal/reactions/KAS10 KAS10]
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* [http://bigg.ucsd.edu/universal/reactions/KAS11 KAS11]
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* [http://bigg.ucsd.edu/universal/reactions/KAS12 KAS12]
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* [http://bigg.ucsd.edu/universal/reactions/KAS13 KAS13]
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−
* [http://bigg.ucsd.edu/universal/reactions/KAS2 KAS2]
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−
* [http://bigg.ucsd.edu/universal/reactions/KAS3 KAS3]
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−
* [http://bigg.ucsd.edu/universal/reactions/KAS4 KAS4]
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−
* [http://bigg.ucsd.edu/universal/reactions/KAS5 KAS5]
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−
* [http://bigg.ucsd.edu/universal/reactions/KAS6 KAS6]
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−
* [http://bigg.ucsd.edu/universal/reactions/KAS9 KAS9]
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−
* [http://bigg.ucsd.edu/universal/reactions/OGMEACPD OGMEACPD]
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−
* [http://bigg.ucsd.edu/universal/reactions/OPMEACPD OPMEACPD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PMEACPE PMEACPE]
+
 
== External links  ==
 
== External links  ==
−
{{#set: common_name=Biotin metabolism}}
+
* RHEA:
−
{{#set: reaction found=28}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12813 12813]
−
{{#set: total reaction=67}}
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* EC Number : 5.1.1.3
−
{{#set: completion rate=42.0}}
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* MetaNetX (MNX) Equation : MNXR100288
 +
* KEGG Reaction : R00260
 +
* BioCyc : META:GLUTRACE-RXN
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Glutamate racemase}}
 +
{{#set: gene associated=B471_RS0110265}}
 +
{{#set: in pathway=map01100|map00471}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:37, 21 March 2018

Reaction GLUR

  • direction:
    • REVERSIBLE
  • common name:
    • Glutamate racemase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-Glutamate[c] <=> 1.0 L-Glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 5.1.1.3
  • MetaNetX (MNX) Equation : MNXR100288
  • KEGG Reaction : R00260
  • BioCyc : META:GLUTRACE-RXN




Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=GLUR&oldid=7494"