Difference between revisions of "ADCS"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520] == * common_name: ** Amino sugar and nucleotide sugar metabolism * Synonym(s): ==...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ADCS ADCS] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-amino-4-deoxychorismate synthase *...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ADCS ADCS] ==
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* common_name:
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* direction:
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** Amino sugar and nucleotide sugar metabolism
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** LEFT-TO-RIGHT
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* common name:
 +
** 4-amino-4-deoxychorismate synthase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''19''' reactions found over '''80''' reactions in the full pathway
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* With identifiers:
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* [[ACM6PH]]
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** 1.0 [[gln__L]][c] '''+''' 1.0 [[chor]][c] '''=>''' 1.0 [[glu__L]][c] '''+''' 1.0 [[4adcho]][c]
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** 0 associated gene:
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* With common name(s):
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** 1 reconstruction source(s) associated:
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** 1.0 L-Glutamine[c] '''+''' 1.0 Chorismate[c] '''=>''' 1.0 L-Glutamate[c] '''+''' 1.0 4-amino-4-deoxychorismate[c]
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*** [[manual-reaction_to_add_delete]]
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* [[AGDC]]
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== Genes associated with this reaction  ==
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** 1 associated gene(s):
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== Pathways  ==
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*** [[B471_RS24325]]
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* [[map00790]]: [http://www.genome.jp/dbget-bin/www_bget?map00790 map00790]
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** 1 reconstruction source(s) associated:
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** '''10''' reactions found over '''41''' reactions in the full pathway
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*** [[orthology-bsubtilis]]
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== Reconstruction information  ==
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* [[G1PACT]]
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* Category: [[manual]]
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** 1 associated gene(s):
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** Source: [[manual-reaction_to_add_delete]]
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*** [[B471_RS0107445]]
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*** Comment: [[reaction added from literature evidence or biological expertise]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[G6PDA]]
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** 1 associated gene(s):
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*** [[B471_RS22800]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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* [[GALUi]]
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** 1 associated gene(s):
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*** [[B471_RS0107615]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[GF6PTA]]
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** 1 associated gene(s):
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*** [[B471_RS0105605]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[HEX1]]
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** 1 associated gene(s):
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*** [[B471_RS0108295]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[MAN1PT2]]
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** 1 associated gene(s):
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*** [[B471_RS0107610]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[MAN6PI]]
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** 1 associated gene(s):
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*** [[B471_RS0107610]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aferrooxidans]]
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* [[PGAMT]]
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** 1 associated gene(s):
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*** [[B471_RS0105610]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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−
* [[PGI]]
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** 1 associated gene(s):
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*** [[B471_RS0108285]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[PGMT]]
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** 2 associated gene(s):
+
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*** [[B471_RS0105610]]
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−
*** [[B471_RS0119315]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[UAG2E]]
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** 2 associated gene(s):
+
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*** [[B471_RS0112885]]
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*** [[B471_RS0114280]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[UAG2EMA]]
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** 2 associated gene(s):
+
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*** [[B471_RS0112885]]
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−
*** [[B471_RS0114280]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[UAGCVT]]
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** 1 associated gene(s):
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*** [[B471_RS0105355]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[UAGDP]]
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** 1 associated gene(s):
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*** [[B471_RS0107445]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[UAPGR]]
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** 1 associated gene(s):
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*** [[B471_RS0108995]]
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** 3 reconstruction source(s) associated:
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−
*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[UDPG4E]]
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** 1 associated gene(s):
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*** [[B471_RS21920]]
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** 1 reconstruction source(s) associated:
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−
*** [[orthology-cljungdahlii]]
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* [[UDPGD]]
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** 2 associated gene(s):
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*** [[B471_RS0114430]]
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*** [[B471_RS0114260]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/AAPT AAPT]
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* [http://bigg.ucsd.edu/universal/reactions/ABFPT ABFPT]
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* [http://bigg.ucsd.edu/universal/reactions/ABFPTh ABFPTh]
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* [http://bigg.ucsd.edu/universal/reactions/ACGAM2E ACGAM2E]
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* [http://bigg.ucsd.edu/universal/reactions/ACGAM6PS ACGAM6PS]
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* [http://bigg.ucsd.edu/universal/reactions/ACGAMK ACGAMK]
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* [http://bigg.ucsd.edu/universal/reactions/ACGAMPM ACGAMPM]
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* [http://bigg.ucsd.edu/universal/reactions/ACNAM9PL ACNAM9PL]
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* [http://bigg.ucsd.edu/universal/reactions/ACNAMPH ACNAMPH]
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* [http://bigg.ucsd.edu/universal/reactions/ACNMCT ACNMCT]
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* [http://bigg.ucsd.edu/universal/reactions/ACNML ACNML]
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* [http://bigg.ucsd.edu/universal/reactions/ACNPLYS ACNPLYS]
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* [http://bigg.ucsd.edu/universal/reactions/AHEXASE3 AHEXASE3]
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* [http://bigg.ucsd.edu/universal/reactions/AM6PTh AM6PTh]
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* [http://bigg.ucsd.edu/universal/reactions/AMANAPEr AMANAPEr]
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* [http://bigg.ucsd.edu/universal/reactions/AMANK AMANK]
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* [http://bigg.ucsd.edu/universal/reactions/CDPGLC46DH CDPGLC46DH]
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* [http://bigg.ucsd.edu/universal/reactions/CMPSASn CMPSASn]
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* [http://bigg.ucsd.edu/universal/reactions/F1PGT F1PGT]
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* [http://bigg.ucsd.edu/universal/reactions/FK FK]
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* [http://bigg.ucsd.edu/universal/reactions/G1PCTYT G1PCTYT]
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* [http://bigg.ucsd.edu/universal/reactions/G6PI G6PI]
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* [http://bigg.ucsd.edu/universal/reactions/G6PI2 G6PI2]
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* [http://bigg.ucsd.edu/universal/reactions/G6PI3 G6PI3]
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* [http://bigg.ucsd.edu/universal/reactions/G6PI_1 G6PI_1]
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* [http://bigg.ucsd.edu/universal/reactions/G6PIh G6PIh]
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* [http://bigg.ucsd.edu/universal/reactions/GALKh GALKh]
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* [http://bigg.ucsd.edu/universal/reactions/GALKr GALKr]
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* [http://bigg.ucsd.edu/universal/reactions/GALT GALT]
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* [http://bigg.ucsd.edu/universal/reactions/GF6PTA_1 GF6PTA_1]
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* [http://bigg.ucsd.edu/universal/reactions/GFUCS GFUCS]
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* [http://bigg.ucsd.edu/universal/reactions/GLGC GLGC]
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* [http://bigg.ucsd.edu/universal/reactions/GLPThi GLPThi]
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* [http://bigg.ucsd.edu/universal/reactions/GLUKA GLUKA]
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* [http://bigg.ucsd.edu/universal/reactions/GLUKAh GLUKAh]
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* [http://bigg.ucsd.edu/universal/reactions/GMAND GMAND]
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* [http://bigg.ucsd.edu/universal/reactions/GOFUCR GOFUCR]
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* [http://bigg.ucsd.edu/universal/reactions/HEX10 HEX10]
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* [http://bigg.ucsd.edu/universal/reactions/HEX4 HEX4]
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* [http://bigg.ucsd.edu/universal/reactions/HEX7 HEX7]
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* [http://bigg.ucsd.edu/universal/reactions/MAN1PT MAN1PT]
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* [http://bigg.ucsd.edu/universal/reactions/MPAKI MPAKI]
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* [http://bigg.ucsd.edu/universal/reactions/PGCM PGCM]
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* [http://bigg.ucsd.edu/universal/reactions/PGIA PGIA]
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* [http://bigg.ucsd.edu/universal/reactions/PGIAh PGIAh]
+
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* [http://bigg.ucsd.edu/universal/reactions/PGIBh PGIBh]
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* [http://bigg.ucsd.edu/universal/reactions/PGMTh PGMTh]
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* [http://bigg.ucsd.edu/universal/reactions/PMANM PMANM]
+
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* [http://bigg.ucsd.edu/universal/reactions/SQD1 SQD1]
+
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* [http://bigg.ucsd.edu/universal/reactions/UA4E UA4E]
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* [http://bigg.ucsd.edu/universal/reactions/UACMAMO UACMAMO]
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* [http://bigg.ucsd.edu/universal/reactions/UAG4Ei UAG4Ei]
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* [http://bigg.ucsd.edu/universal/reactions/UDPACGLP UDPACGLP]
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* [http://bigg.ucsd.edu/universal/reactions/UDPGALM UDPGALM]
+
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* [http://bigg.ucsd.edu/universal/reactions/UDPGALOR UDPGALOR]
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* [http://bigg.ucsd.edu/universal/reactions/UDPGLDC UDPGLDC]
+
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* [http://bigg.ucsd.edu/universal/reactions/UDPGLDCg UDPGLDCg]
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* [http://bigg.ucsd.edu/universal/reactions/UDPSQS UDPSQS]
+
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* [http://bigg.ucsd.edu/universal/reactions/UGE UGE]
+
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* [http://bigg.ucsd.edu/universal/reactions/UGLT UGLT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ULA4NFT ULA4NFT]
+
 
== External links  ==
 
== External links  ==
−
{{#set: common_name=Amino sugar and nucleotide sugar metabolism}}
+
* RHEA:
−
{{#set: reaction found=19}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11672 11672]
−
{{#set: total reaction=80}}
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* BioCyc : META:PABASYN-RXN
−
{{#set: completion rate=24.0}}
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* MetaNetX (MNX) Equation : MNXR95440
 +
* KEGG Reaction : R01716
 +
* EC Number : 2.6.1.85
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=4-amino-4-deoxychorismate synthase}}
 +
{{#set: in pathway=map00790}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=manual-reaction_to_add_delete}}
 +
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}

Latest revision as of 15:38, 21 March 2018

Reaction ADCS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 4-amino-4-deoxychorismate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Glutamine[c] + 1.0 Chorismate[c] => 1.0 L-Glutamate[c] + 1.0 4-amino-4-deoxychorismate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:PABASYN-RXN
  • MetaNetX (MNX) Equation : MNXR95440
  • KEGG Reaction : R01716
  • EC Number : 2.6.1.85




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