Difference between revisions of "IPPMIb"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00430 map00430] == * common_name: ** Taurine and hypotaurine metabolism * Synonym(s): == Reaction(...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/IPPMIb IPPMIb] == * direction: ** REVERSIBLE * common name: ** 2-isopropylmalate hydratase * Synony...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00430 map00430] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/IPPMIb IPPMIb] ==
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* common_name:
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* direction:
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** Taurine and hypotaurine metabolism
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** REVERSIBLE
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* common name:
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** 2-isopropylmalate hydratase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''24''' reactions in the full pathway
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* With identifiers:
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* [[ALAD_L]]
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** 1.0 [[2ippm]][c] '''+''' 1.0 [[h2o]][c] '''<=>''' 1.0 [[3c3hmp]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[B471_RS0101190]]
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** 1.0 2-Isopropylmaleate[c] '''+''' 1.0 H2O H2O[c] '''<=>''' 1.0 3-Carboxy-3-hydroxy-4-methylpentanoate[c]
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** 1 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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== Genes associated with this reaction  ==
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* [[ASP1DC]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 associated gene(s):
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* Gene: [[B471_RS0105965]]
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*** [[B471_RS0116125]]
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** Source: [[orthology-cljungdahlii]]
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** 2 reconstruction source(s) associated:
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* Gene: [[B471_RS0105520]]
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*** [[orthology-bsubtilis]]
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** Source: [[orthology-cljungdahlii]]
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*** [[orthology-aferrooxidans]]
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** Source: [[orthology-bsubtilis]]
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== Reaction(s) not found ==
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* Gene: [[B471_RS0105525]]
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* [http://bigg.ucsd.edu/universal/reactions/3SALACBOXL 3SALACBOXL]
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** Source: [[orthology-cljungdahlii]]
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* [http://bigg.ucsd.edu/universal/reactions/ACKr ACKr]
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** Source: [[orthology-bsubtilis]]
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* [http://bigg.ucsd.edu/universal/reactions/ACKrh ACKrh]
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== Pathways  ==
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* [http://bigg.ucsd.edu/universal/reactions/ACKrm ACKrm]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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* [http://bigg.ucsd.edu/universal/reactions/APAT2rm APAT2rm]
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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* [http://bigg.ucsd.edu/universal/reactions/ARGDh ARGDh]
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* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
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* [http://bigg.ucsd.edu/universal/reactions/BAAT1x BAAT1x]
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** '''26''' reactions found over '''80''' reactions in the full pathway
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* [http://bigg.ucsd.edu/universal/reactions/BAAT2x BAAT2x]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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* [http://bigg.ucsd.edu/universal/reactions/BAAT3x BAAT3x]
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** '''212''' reactions found over '''1054''' reactions in the full pathway
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* [http://bigg.ucsd.edu/universal/reactions/CYSAMO CYSAMO]
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* [[map00290]]: [http://www.genome.jp/dbget-bin/www_bget?map00290 map00290]
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* [http://bigg.ucsd.edu/universal/reactions/CYSDO CYSDO]
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** '''15''' reactions found over '''49''' reactions in the full pathway
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* [http://bigg.ucsd.edu/universal/reactions/CYSO CYSO]
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== Reconstruction information  ==
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* [http://bigg.ucsd.edu/universal/reactions/GDH1 GDH1]
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* Category: [[orthology]]
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* [http://bigg.ucsd.edu/universal/reactions/GLUDC GLUDC]
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** Source: [[orthology-cljungdahlii]]
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* [http://bigg.ucsd.edu/universal/reactions/LCYSTCBOXL LCYSTCBOXL]
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*** Tool: [[pantograph]]
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* [http://bigg.ucsd.edu/universal/reactions/PCPPTh PCPPTh]
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** Source: [[orthology-bsubtilis]]
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* [http://bigg.ucsd.edu/universal/reactions/PCPPTm PCPPTm]
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*** Tool: [[pantograph]]
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* [http://bigg.ucsd.edu/universal/reactions/PTA2 PTA2]
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* [http://bigg.ucsd.edu/universal/reactions/PTAr PTAr]
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* [http://bigg.ucsd.edu/universal/reactions/PTArh PTArh]
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* [http://bigg.ucsd.edu/universal/reactions/PTArm PTArm]
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* [http://bigg.ucsd.edu/universal/reactions/TAUDO TAUDO]
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== External links  ==
 
== External links  ==
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{{#set: common_name=Taurine and hypotaurine metabolism}}
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* RHEA:
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{{#set: reaction found=2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16293 16293]
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{{#set: total reaction=24}}
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* EC Number : 4.2.1.33
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{{#set: completion rate=8.0}}
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* MetaNetX (MNX) Equation : MNXR100826
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* KEGG Reaction : R03968
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* BioCyc : META:3-ISOPROPYLMALISOM-RXN
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=2-isopropylmalate hydratase}}
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{{#set: gene associated=B471_RS0105965|B471_RS0105520|B471_RS0105525}}
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{{#set: in pathway=map01100|map01210|map01110|map00290}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:38, 21 March 2018

Reaction IPPMIb

  • direction:
    • REVERSIBLE
  • common name:
    • 2-isopropylmalate hydratase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 2-Isopropylmaleate[c] + 1.0 H2O H2O[c] <=> 1.0 3-Carboxy-3-hydroxy-4-methylpentanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 4.2.1.33
  • MetaNetX (MNX) Equation : MNXR100826
  • KEGG Reaction : R03968
  • BioCyc : META:3-ISOPROPYLMALISOM-RXN




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