Difference between revisions of "ACALD"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00670 map00670] == * common_name: ** One carbon pool by folate * Synonym(s): == Reaction(s) found...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACALD ACALD] == * direction: ** REVERSIBLE * common name: ** Acetaldehyde dehydrogenase (acetylatin...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00670 map00670] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ACALD ACALD] ==
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* common_name:
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* direction:
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** One carbon pool by folate
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** REVERSIBLE
 +
* common name:
 +
** Acetaldehyde dehydrogenase (acetylating)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''13''' reactions found over '''65''' reactions in the full pathway
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* With identifiers:
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* [[AICART]]
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** 1.0 [[coa]][c] '''+''' 1.0 [[acald]][c] '''+''' 1.0 [[nad]][c] '''<=>''' 1.0 [[accoa]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[nadh]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[B471_RS0105245]]
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** 1.0 Coenzyme A[c] '''+''' 1.0 Acetaldehyde[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''<=>''' 1.0 Acetyl-CoA[c] '''+''' 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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== Genes associated with this reaction  ==
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*** [[orthology-bsubtilis]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aferrooxidans]]
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* Gene: [[B471_RS0100095]]
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* [[DHFR]]
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** Source: [[orthology-cljungdahlii]]
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** 0 associated gene:
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* Gene: [[B471_RS0110020]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-cljungdahlii]]
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*** [[manual-reaction_to_add_delete]]
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* Gene: [[B471_RS0119455]]
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* [[FOLR2]]
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** Source: [[orthology-cljungdahlii]]
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** 0 associated gene:
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* Gene: [[B471_RS0113260]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-cljungdahlii]]
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*** [[manual-reaction_to_add_delete]]
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* Gene: [[B471_RS0115620]]
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* [[FTHFD]]
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** Source: [[orthology-cljungdahlii]]
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** 1 associated gene(s):
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== Pathways  ==
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*** [[B471_RS0103250]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** 1 reconstruction source(s) associated:
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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*** [[orthology-bsubtilis]]
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* [[map01220]]: [http://www.genome.jp/dbget-bin/www_bget?map01220 map01220]
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* [[FTHFLi]]
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** '''1''' reactions found over '''60''' reactions in the full pathway
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** 1 associated gene(s):
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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*** [[B471_RS0106145]]
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** '''101''' reactions found over '''715''' reactions in the full pathway
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** 1 reconstruction source(s) associated:
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* [[map00650]]: [http://www.genome.jp/dbget-bin/www_bget?map00650 map00650]
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*** [[orthology-cljungdahlii]]
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** '''21''' reactions found over '''156''' reactions in the full pathway
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* [[GARFT]]
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* [[map00622]]: [http://www.genome.jp/dbget-bin/www_bget?map00622 map00622]
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** 2 associated gene(s):
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** '''1''' reactions found over '''32''' reactions in the full pathway
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*** [[B471_RS0101625]]
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* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
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*** [[B471_RS0105250]]
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** '''22''' reactions found over '''163''' reactions in the full pathway
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** 3 reconstruction source(s) associated:
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* [[map00621]]: [http://www.genome.jp/dbget-bin/www_bget?map00621 map00621]
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*** [[orthology-cljungdahlii]]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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*** [[orthology-bsubtilis]]
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* [[map00362]]: [http://www.genome.jp/dbget-bin/www_bget?map00362 map00362]
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*** [[orthology-aferrooxidans]]
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** '''10''' reactions found over '''114''' reactions in the full pathway
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* [[GHMT2r]]
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* [[map00360]]: [http://www.genome.jp/dbget-bin/www_bget?map00360 map00360]
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** 1 associated gene(s):
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** '''7''' reactions found over '''109''' reactions in the full pathway
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*** [[B471_RS0101930]]
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== Reconstruction information  ==
−
** 3 reconstruction source(s) associated:
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* Category: [[orthology]]
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*** [[orthology-cljungdahlii]]
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** Source: [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** Tool: [[pantograph]]
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*** [[orthology-aferrooxidans]]
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−
* [[GLYCL]]
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−
** 6 associated gene(s):
+
−
*** [[B471_RS0101935]]
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−
*** [[B471_RS0101930]]
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−
*** [[B471_RS0101950]]
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−
*** [[B471_RS0101940]]
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*** [[B471_RS0101945]]
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*** [[B471_RS0110920]]
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** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
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−
*** [[orthology-aferrooxidans]]
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−
* [[METS]]
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** 1 associated gene(s):
+
−
*** [[B471_RS0109820]]
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** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
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−
* [[MTHFC]]
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** 1 associated gene(s):
+
−
*** [[B471_RS0101840]]
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** 3 reconstruction source(s) associated:
+
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*** [[orthology-cljungdahlii]]
+
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*** [[orthology-bsubtilis]]
+
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*** [[orthology-aferrooxidans]]
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* [[MTHFD]]
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** 1 associated gene(s):
+
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*** [[B471_RS0101840]]
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** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
+
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*** [[orthology-aferrooxidans]]
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* [[MTHFR3]]
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** 1 associated gene(s):
+
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*** [[B471_RS21850]]
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** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
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* [[TMDS]]
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** 0 associated gene:
+
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** 1 reconstruction source(s) associated:
+
−
*** [[manual-reaction_to_add_delete]]
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−
== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/DHFOR DHFOR]
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* [http://bigg.ucsd.edu/universal/reactions/DHFR2i DHFR2i]
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* [http://bigg.ucsd.edu/universal/reactions/DHFRim DHFRim]
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* [http://bigg.ucsd.edu/universal/reactions/FGFTh FGFTh]
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* [http://bigg.ucsd.edu/universal/reactions/FGFTm FGFTm]
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* [http://bigg.ucsd.edu/universal/reactions/FMETTRS FMETTRS]
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* [http://bigg.ucsd.edu/universal/reactions/FMETTRSm FMETTRSm]
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* [http://bigg.ucsd.edu/universal/reactions/FOLR2_1 FOLR2_1]
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* [http://bigg.ucsd.edu/universal/reactions/FOMETRi FOMETRi]
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* [http://bigg.ucsd.edu/universal/reactions/FPGFTh FPGFTh]
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* [http://bigg.ucsd.edu/universal/reactions/FPGFTm FPGFTm]
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* [http://bigg.ucsd.edu/universal/reactions/FTAL FTAL]
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* [http://bigg.ucsd.edu/universal/reactions/FTCD FTCD]
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* [http://bigg.ucsd.edu/universal/reactions/FTCL FTCL]
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* [http://bigg.ucsd.edu/universal/reactions/FTHFCL FTHFCL]
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* [http://bigg.ucsd.edu/universal/reactions/FTHFCLm FTHFCLm]
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* [http://bigg.ucsd.edu/universal/reactions/FTHFDH FTHFDH]
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* [http://bigg.ucsd.edu/universal/reactions/FTHFLmi FTHFLmi]
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−
* [http://bigg.ucsd.edu/universal/reactions/GCC2 GCC2]
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* [http://bigg.ucsd.edu/universal/reactions/GCC2bim GCC2bim]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GCCb GCCb]
+
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* [http://bigg.ucsd.edu/universal/reactions/GCCbim GCCbim]
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−
* [http://bigg.ucsd.edu/universal/reactions/GHMT2rm GHMT2rm]
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* [http://bigg.ucsd.edu/universal/reactions/GLUFT GLUFT]
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−
* [http://bigg.ucsd.edu/universal/reactions/GLYCL_2 GLYCL_2]
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* [http://bigg.ucsd.edu/universal/reactions/GLYCLm GLYCLm]
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* [http://bigg.ucsd.edu/universal/reactions/GluForTx GluForTx]
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* [http://bigg.ucsd.edu/universal/reactions/METS_1 METS_1]
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* [http://bigg.ucsd.edu/universal/reactions/METSm METSm]
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* [http://bigg.ucsd.edu/universal/reactions/MTAM MTAM]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MTAM_nh4 MTAM_nh4]
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* [http://bigg.ucsd.edu/universal/reactions/MTHFC_1 MTHFC_1]
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* [http://bigg.ucsd.edu/universal/reactions/MTHFCm MTHFCm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MTHFCm_1 MTHFCm_1]
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* [http://bigg.ucsd.edu/universal/reactions/MTHFCx MTHFCx]
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* [http://bigg.ucsd.edu/universal/reactions/MTHFD2 MTHFD2]
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−
* [http://bigg.ucsd.edu/universal/reactions/MTHFD2i MTHFD2i]
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−
* [http://bigg.ucsd.edu/universal/reactions/MTHFD2m MTHFD2m]
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−
* [http://bigg.ucsd.edu/universal/reactions/MTHFD_1 MTHFD_1]
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−
* [http://bigg.ucsd.edu/universal/reactions/MTHFDm MTHFDm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MTHFDm_1 MTHFDm_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MTHFO MTHFO]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MTHFO_nadp MTHFO_nadp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MTHFR2 MTHFR2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MTHFR2_1 MTHFR2_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MTHFR3_1 MTHFR3_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/THFAT THFAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/THFATm THFATm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/THFOR1 THFOR1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/THFOR2 THFOR2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/TMDS3 TMDS3]
+
−
* [http://bigg.ucsd.edu/universal/reactions/TMDSf TMDSf]
+
 
== External links  ==
 
== External links  ==
−
{{#set: common_name=One carbon pool by folate}}
+
* RHEA:
−
{{#set: reaction found=13}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23288 23288]
−
{{#set: total reaction=65}}
+
* EC Number : 1.2.1.10
−
{{#set: completion rate=20.0}}
+
* MetaNetX (MNX) Equation : MNXR95210
 +
* KEGG Reaction : R00228
 +
* BioCyc : META:ACETALD-DEHYDROG-RXN
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Acetaldehyde dehydrogenase (acetylating)}}
 +
{{#set: gene associated=B471_RS0100095|B471_RS0110020|B471_RS0119455|B471_RS0113260|B471_RS0115620}}
 +
{{#set: in pathway=map01100|map01220|map01120|map00650|map00622|map00620|map00621|map00362|map00360}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:38, 21 March 2018

Reaction ACALD

  • direction:
    • REVERSIBLE
  • common name:
    • Acetaldehyde dehydrogenase (acetylating)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Coenzyme A[c] + 1.0 Acetaldehyde[c] + 1.0 Nicotinamide adenine dinucleotide[c] <=> 1.0 Acetyl-CoA[c] + 1.0 H+[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 1.2.1.10
  • MetaNetX (MNX) Equation : MNXR95210
  • KEGG Reaction : R00228
  • BioCyc : META:ACETALD-DEHYDROG-RXN




Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=ACALD&oldid=7546"