Difference between revisions of "PDH"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/25dhpp 25dhpp] == * common name: ** 2 5 Diamino 6 hydroxy 4 5 phosphoribosylamino pyrimidi...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PDH PDH] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyruvate dehydrogenase * Synonym(s): =...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/25dhpp 25dhpp] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/PDH PDH] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** 2 5 Diamino 6 hydroxy 4  5  phosphoribosylamino  pyrimidine C9H14N5O8P
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** Pyruvate dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[DHPPDA]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1.0 [[nad]][c] '''+''' 1.0 [[pyr]][c] '''+''' 1.0 [[coa]][c] '''=>''' 1.0 [[accoa]][c] '''+''' 1.0 [[co2]][c] '''+''' 1.0 [[nadh]][c]
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* [[GTPCII]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Pyruvate[c] '''+''' 1.0 Coenzyme A[c] '''=>''' 1.0 Acetyl-CoA[c] '''+''' 1.0 CO2 CO2[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[B471_RS0115310]]
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** Source: [[orthology-aferrooxidans]]
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* Gene: [[B471_RS0115315]]
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** Source: [[orthology-aferrooxidans]]
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* Gene: [[B471_RS0110920]]
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** Source: [[orthology-aferrooxidans]]
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* Gene: [[B471_RS0110905]]
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** Source: [[orthology-aferrooxidans]]
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== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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** '''212''' reactions found over '''1054''' reactions in the full pathway
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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** '''101''' reactions found over '''715''' reactions in the full pathway
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* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
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** '''51''' reactions found over '''220''' reactions in the full pathway
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* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
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** '''22''' reactions found over '''163''' reactions in the full pathway
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* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
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** '''20''' reactions found over '''149''' reactions in the full pathway
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* [[map00020]]: [http://www.genome.jp/dbget-bin/www_bget?map00020 map00020]
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** '''10''' reactions found over '''70''' reactions in the full pathway
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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** '''148''' reactions found over '''694''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aferrooxidans]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=2 5 Diamino 6 hydroxy 4  5  phosphoribosylamino  pyrimidine C9H14N5O8P}}
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* EC Number : 1.2.1
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{{#set: consumed by=DHPPDA}}
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* BioCyc : META:PYRUVDEH-RXN
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{{#set: produced by=GTPCII}}
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* MetaNetX (MNX) Equation : MNXR102425
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28042 28042]
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* Reactome : REACT_R-ATH-71397
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* KEGG Reaction : R00209
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Pyruvate dehydrogenase}}
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{{#set: gene associated=B471_RS0115310|B471_RS0115315|B471_RS0110920|B471_RS0110905}}
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{{#set: in pathway=map01100|map01110|map01120|map01200|map00620|map00010|map00020|map01130}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aferrooxidans}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:43, 21 March 2018

Reaction PDH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pyruvate dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 Pyruvate[c] + 1.0 Coenzyme A[c] => 1.0 Acetyl-CoA[c] + 1.0 CO2 CO2[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 1.2.1
  • BioCyc : META:PYRUVDEH-RXN
  • MetaNetX (MNX) Equation : MNXR102425
  • RHEA:
  • Reactome : REACT_R-ATH-71397
  • KEGG Reaction : R00209




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