Difference between revisions of "ARGDC"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/2maacoa 2maacoa] == * common name: ** 2-Methyl-3-acetoacetyl-CoA * Synonym(s): == Reaction(s...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ARGDC ARGDC] == * direction: ** LEFT-TO-RIGHT * common name: ** Arginine decarboxylase * Synonym(s)...") |
||
| Line 1: | Line 1: | ||
| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/ARGDC ARGDC] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Arginine decarboxylase |
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | == | + | * With identifiers: |
| − | == | + | ** 1.0 [[arg__L]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[co2]][c] '''+''' 1.0 [[agm]][c] |
| − | * [[ | + | * With common name(s): |
| + | ** 1.0 L-Arginine[c] '''+''' 1.0 H+[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 1.0 Agmatine[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[B471_RS21410]] | ||
| + | ** Source: [[orthology-cljungdahlii]] | ||
| + | ** Source: [[orthology-bsubtilis]] | ||
| + | * Gene: [[B471_RS21240]] | ||
| + | ** Source: [[orthology-aferrooxidans]] | ||
| + | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''471''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330] | ||
| + | ** '''19''' reactions found over '''149''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-cljungdahlii]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-bsubtilis]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-aferrooxidans]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | * EC Number : 4.1.1.19 |
| − | {{#set: | + | * BioCyc : META:ARGDECARBOX-RXN |
| + | * MetaNetX (MNX) Equation : MNXR95940 | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17641 17641] | ||
| + | * Reactome : REACT_R-ATH-350598 | ||
| + | * KEGG Reaction : R00566 | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=Arginine decarboxylase}} | ||
| + | {{#set: gene associated=B471_RS21410|B471_RS21240}} | ||
| + | {{#set: in pathway=map01100|map00330}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:45, 21 March 2018
Contents
Reaction ARGDC
- direction:
- LEFT-TO-RIGHT
- common name:
- Arginine decarboxylase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 L-Arginine[c] + 1.0 H+[c] => 1.0 CO2 CO2[c] + 1.0 Agmatine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: B471_RS21410
- Source: orthology-cljungdahlii
- Source: orthology-bsubtilis
- Gene: B471_RS21240
- Source: orthology-aferrooxidans
Pathways
- map01100: map01100
- 471 reactions found over 2349 reactions in the full pathway
- map00330: map00330
- 19 reactions found over 149 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-cljungdahlii
- Tool: pantograph
- Source: orthology-bsubtilis
- Tool: pantograph
- Source: orthology-aferrooxidans
- Tool: pantograph
- Source: orthology-cljungdahlii
External links
- EC Number : 4.1.1.19
- BioCyc : META:ARGDECARBOX-RXN
- MetaNetX (MNX) Equation : MNXR95940
- RHEA:
- Reactome : REACT_R-ATH-350598
- KEGG Reaction : R00566
