Difference between revisions of "UGMDDS"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/phom phom] == * common name: ** O-Phospho-L-homoserine * Synonym(s): == Reaction(s) known to...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UGMDDS UGMDDS] == * direction: ** LEFT-TO-RIGHT * common name: ** UDP-N-acetylmuramoyl-L-alanyl-D-g...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/UGMDDS UGMDDS] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine synthetase |
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | == | + | ** 1.0 [[alaala]][c] '''+''' 1.0 [[ugmd]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[ugmda]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[pi]][c] |
| − | * [[ | + | * With common name(s): |
| − | == | + | ** 1.0 D-Alanyl-D-alanine[c] '''+''' 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 Phosphate[c] |
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[B471_RS21735]] | ||
| + | ** Source: [[orthology-cljungdahlii]] | ||
| + | ** Source: [[orthology-bsubtilis]] | ||
| + | ** Source: [[orthology-aferrooxidans]] | ||
| + | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''471''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550] | ||
| + | ** '''14''' reactions found over '''27''' reactions in the full pathway | ||
| + | * [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300] | ||
| + | ** '''10''' reactions found over '''34''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-cljungdahlii]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-bsubtilis]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-aferrooxidans]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | * MetaNetX (MNX) Equation : MNXR105094 |
| − | {{#set: | + | * EC Number : 6.3.2.10 |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| + | {{#set: common name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine synthetase}} | ||
| + | {{#set: gene associated=B471_RS21735}} | ||
| + | {{#set: in pathway=map01100|map00550|map00300}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:48, 21 March 2018
Contents
Reaction UGMDDS
- direction:
- LEFT-TO-RIGHT
- common name:
- UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine synthetase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 D-Alanyl-D-alanine[c] + 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 H+[c] + 1.0 Phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: B471_RS21735
- Source: orthology-cljungdahlii
- Source: orthology-bsubtilis
- Source: orthology-aferrooxidans
Pathways
- map01100: map01100
- 471 reactions found over 2349 reactions in the full pathway
- map00550: map00550
- 14 reactions found over 27 reactions in the full pathway
- map00300: map00300
- 10 reactions found over 34 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-cljungdahlii
- Tool: pantograph
- Source: orthology-bsubtilis
- Tool: pantograph
- Source: orthology-aferrooxidans
- Tool: pantograph
- Source: orthology-cljungdahlii
External links
- MetaNetX (MNX) Equation : MNXR105094
- EC Number : 6.3.2.10
