Difference between revisions of "PGCD"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/spmd spmd] == * common name: ** Spermidine * Synonym(s): == Reaction(s) known to consume the...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PGCD PGCD] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoglycerate dehydrogenase * Syno...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/PGCD PGCD] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Phosphoglycerate dehydrogenase |
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | * [[ | + | ** 1.0 [[nad]][c] '''+''' 1.0 [[3pg]][c] '''=>''' 1.0 [[3php]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[h]][c] |
| − | == | + | * With common name(s): |
| − | * [[ | + | ** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 3-Phospho-D-glycerate[c] '''=>''' 1.0 3-Phosphohydroxypyruvate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 H+[c] |
| − | == | + | |
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[B471_RS0105500]] | ||
| + | ** Source: [[orthology-cljungdahlii]] | ||
| + | ** Source: [[orthology-bsubtilis]] | ||
| + | ** Source: [[orthology-aferrooxidans]] | ||
| + | * Gene: [[B471_RS0108770]] | ||
| + | ** Source: [[orthology-cljungdahlii]] | ||
| + | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''471''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120] | ||
| + | ** '''101''' reactions found over '''715''' reactions in the full pathway | ||
| + | * [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200] | ||
| + | ** '''51''' reactions found over '''220''' reactions in the full pathway | ||
| + | * [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230] | ||
| + | ** '''78''' reactions found over '''228''' reactions in the full pathway | ||
| + | * [[map00680]]: [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680] | ||
| + | ** '''14''' reactions found over '''75''' reactions in the full pathway | ||
| + | * [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260] | ||
| + | ** '''24''' reactions found over '''133''' reactions in the full pathway | ||
| + | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130] | ||
| + | ** '''148''' reactions found over '''694''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-cljungdahlii]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-bsubtilis]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-aferrooxidans]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | * EC Number : 1.1.1.95 |
| − | {{#set: | + | * BioCyc : META:PGLYCDEHYDROG-RXN |
| − | {{#set: | + | * MetaNetX (MNX) Equation : MNXR102527 |
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12641 12641] | ||
| + | * Reactome : REACT_R-ATH-977348 | ||
| + | * KEGG Reaction : R01513 | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=Phosphoglycerate dehydrogenase}} | ||
| + | {{#set: gene associated=B471_RS0105500|B471_RS0108770}} | ||
| + | {{#set: in pathway=map01100|map01120|map01200|map01230|map00680|map00260|map01130}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:48, 21 March 2018
Contents
Reaction PGCD
- direction:
- LEFT-TO-RIGHT
- common name:
- Phosphoglycerate dehydrogenase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 3-Phospho-D-glycerate[c] => 1.0 3-Phosphohydroxypyruvate[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: B471_RS0105500
- Source: orthology-cljungdahlii
- Source: orthology-bsubtilis
- Source: orthology-aferrooxidans
- Gene: B471_RS0108770
- Source: orthology-cljungdahlii
Pathways
- map01100: map01100
- 471 reactions found over 2349 reactions in the full pathway
- map01120: map01120
- 101 reactions found over 715 reactions in the full pathway
- map01200: map01200
- 51 reactions found over 220 reactions in the full pathway
- map01230: map01230
- 78 reactions found over 228 reactions in the full pathway
- map00680: map00680
- 14 reactions found over 75 reactions in the full pathway
- map00260: map00260
- 24 reactions found over 133 reactions in the full pathway
- map01130: map01130
- 148 reactions found over 694 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-cljungdahlii
- Tool: pantograph
- Source: orthology-bsubtilis
- Tool: pantograph
- Source: orthology-aferrooxidans
- Tool: pantograph
- Source: orthology-cljungdahlii
External links
- EC Number : 1.1.1.95
- BioCyc : META:PGLYCDEHYDROG-RXN
- MetaNetX (MNX) Equation : MNXR102527
- RHEA:
- Reactome : REACT_R-ATH-977348
- KEGG Reaction : R01513
