Difference between revisions of "2ippm"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MTHFC MTHFC] == * direction: ** REVERSIBLE * common name: ** Methenyltetrahydrofolate cyclohydrolas...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AGM3PA AGM3PA] == * direction: ** LEFT-TO-RIGHT * common name: ** N-Acetyl-D-glucosamine(anhydrous)...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/MTHFC MTHFC] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/AGM3PA AGM3PA] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Methenyltetrahydrofolate cyclohydrolase
+
** N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide amidase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h2o]][c] '''+''' 1.0 [[methf]][c] '''<=>''' 1.0 [[10fthf]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[anhgm3p]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[anhgm]][c] '''+''' 1.0 [[LalaDgluMdap]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O H2O[c] '''+''' 1.0 5,10-Methenyltetrahydrofolate[c] '''<=>''' 1.0 10-Formyltetrahydrofolate[c] '''+''' 1.0 H+[c]
+
** 1.0 N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid[c] '''+''' 1.0 L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[B471_RS0101840]]
 
−
** [[pantograph]]-[[cljungdahlii]]
 
−
** [[pantograph]]-[[bsubtilis]]
 
−
** [[pantograph]]-[[aferrooxidans]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
−
** '''51''' reactions found over '''220''' reactions in the full pathway
 
−
* [[map00670]]: [http://www.genome.jp/dbget-bin/www_bget?map00670 map00670]
 
−
** '''13''' reactions found over '''65''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''101''' reactions found over '''715''' reactions in the full pathway
 
−
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
 
−
** '''25''' reactions found over '''157''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
+
** Source: [[manual-reaction_to_add_delete]]
−
*** [[aferrooxidans]]
+
*** Comment: [[reaction added from literature evidence or biological expertise]]
−
*** [[cljungdahlii]]
+
−
*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR95543
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23700 23700]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* Reactome : REACT_R-ATH-6801462
+
{{#set: common name=N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide amidase}}
−
* MetaNetX (MNX) Equation : MNXR101748
+
{{#set: in pathway=}}
−
* KEGG Reaction : R01655
+
{{#set: reconstruction category=manual}}
−
* EC Number : 3.5.4.9
+
{{#set: reconstruction source=manual-reaction_to_add_delete}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}
−
{{#set: common name=Methenyltetrahydrofolate cyclohydrolase}}
+
−
{{#set: gene associated=B471_RS0101840}}
+
−
{{#set: in pathway=map01100|map01200|map00670|map01120|map00720}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aferrooxidans|cljungdahlii|bsubtilis}}
+

Revision as of 00:32, 21 March 2018

Reaction AGM3PA

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide amidase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide[c] + 1.0 H2O H2O[c] => 1.0 N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid[c] + 1.0 L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR95543




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