Difference between revisions of "3OAR100"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP8 PUNP8] == * direction: ** REVERSIBLE * common name: ** Purine nucleoside phosphorylase nebul...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UDPGD UDPGD] == * direction: ** LEFT-TO-RIGHT * common name: ** UDPglucose 6-dehydrogenase * Synony...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP8 PUNP8] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/UDPGD UDPGD] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Purine nucleoside phosphorylase  nebularine
+
** UDPglucose 6-dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[pi]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[nebari]][c] '''<=>''' 1.0 [[purine]][c] '''+''' 1.0 [[r1p]][c]
+
** 1.0 [[udpg]][c] '''+''' 2.0 [[nad]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 2.0 [[nadh]][c] '''+''' 1.0 [[udpglcur]][c] '''+''' 3.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Phosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 Nebularine C10H12N4O4[c] '''<=>''' 1.0 Purine C5H5N4[c] '''+''' 1.0 Alpha-D-Ribose 1-phosphate[c]
+
** 1.0 UDPglucose[c] '''+''' 2.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 H2O H2O[c] '''=>''' 2.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 UDP-D-glucuronate[c] '''+''' 3.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0100890]]
+
* [[B471_RS0114430]]
 
** [[pantograph]]-[[bsubtilis]]
 
** [[pantograph]]-[[bsubtilis]]
 +
** [[pantograph]]-[[aferrooxidans]]
 +
* [[B471_RS0114260]]
 +
** [[pantograph]]-[[cljungdahlii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00520]]: [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520]
 +
** '''19''' reactions found over '''80''' reactions in the full pathway
 +
* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
 +
** '''6''' reactions found over '''54''' reactions in the full pathway
 +
* [[map00053]]: [http://www.genome.jp/dbget-bin/www_bget?map00053 map00053]
 +
** '''3''' reactions found over '''50''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[bsubtilis]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* EC Number : 1.1.1.22
 +
* BioCyc : META:UGD-RXN
 +
* MetaNetX (MNX) Equation : MNXR105063
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19805 19805]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23596 23596]
−
* MetaNetX (MNX) Equation : MNXR103350
+
* Reactome : REACT_R-ATH-173597
−
* KEGG Reaction : R08368
+
* KEGG Reaction : R00286
−
* EC Number : 2.4.2.1
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=UDPglucose 6-dehydrogenase}}
−
{{#set: common name=Purine nucleoside phosphorylase  nebularine }}
+
{{#set: gene associated=B471_RS0114430|B471_RS0114260}}
−
{{#set: gene associated=B471_RS0100890}}
+
{{#set: in pathway=map01100|map00520|map00040|map00053}}
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=bsubtilis}}
 

Revision as of 00:42, 21 March 2018

Reaction UDPGD

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • UDPglucose 6-dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 UDPglucose[c] + 2.0 Nicotinamide adenine dinucleotide[c] + 1.0 H2O H2O[c] => 2.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 UDP-D-glucuronate[c] + 3.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 1.1.1.22
  • BioCyc : META:UGD-RXN
  • MetaNetX (MNX) Equation : MNXR105063
  • RHEA:
  • Reactome : REACT_R-ATH-173597
  • KEGG Reaction : R00286




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