Difference between revisions of "3gmp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACOADH2 ACOADH2] == * direction: ** LEFT-TO-RIGHT * common name: ** Acyl CoA dehydrogenase isobuty...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ILETA ILETA] == * direction: ** REVERSIBLE * common name: ** Isoleucine transaminase * Synonym(s):...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACOADH2 ACOADH2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ILETA ILETA] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Acyl CoA dehydrogenase  isobutyryl CoA
+
** Isoleucine transaminase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2.0 [[ibcoa]][c] '''+''' 1.0 [[o2]][c] '''=>''' 2.0 [[2mp2coa]][c] '''+''' 2.0 [[h2o]][c]
+
** 1.0 [[akg]][c] '''+''' 1.0 [[ile__L]][c] '''<=>''' 1.0 [[glu__L]][c] '''+''' 1.0 [[3mop]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2.0 Isobutyryl-CoA[c] '''+''' 1.0 O2 O2[c] '''=>''' 2.0 2-Methylprop-2-enoyl-CoA[c] '''+''' 2.0 H2O H2O[c]
+
** 1.0 2-Oxoglutarate[c] '''+''' 1.0 L-Isoleucine[c] '''<=>''' 1.0 L-Glutamate[c] '''+''' 1.0 (S)-3-Methyl-2-oxopentanoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0108385]]
+
* [[B471_RS0110105]]
 +
** [[pantograph]]-[[cljungdahlii]]
 
** [[pantograph]]-[[bsubtilis]]
 
** [[pantograph]]-[[bsubtilis]]
 +
** [[pantograph]]-[[aferrooxidans]]
 +
* [[B471_RS0102340]]
 +
** [[pantograph]]-[[cljungdahlii]]
 +
** [[pantograph]]-[[bsubtilis]]
 +
* [[B471_RS0106435]]
 +
** [[pantograph]]-[[cljungdahlii]]
 +
** [[pantograph]]-[[bsubtilis]]
 +
* [[B471_RS0109150]]
 +
** [[pantograph]]-[[cljungdahlii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00770]]: [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770]
 +
** '''20''' reactions found over '''75''' reactions in the full pathway
 +
* [[map00290]]: [http://www.genome.jp/dbget-bin/www_bget?map00290 map00290]
 +
** '''15''' reactions found over '''49''' reactions in the full pathway
 +
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
 +
** '''26''' reactions found over '''80''' reactions in the full pathway
 +
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
 +
** '''24''' reactions found over '''135''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 +
* [[map00966]]: [http://www.genome.jp/dbget-bin/www_bget?map00966 map00966]
 +
** '''3''' reactions found over '''10''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00280]]: [http://www.genome.jp/dbget-bin/www_bget?map00280 map00280]
 +
** '''16''' reactions found over '''155''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[bsubtilis]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR95362
+
* RHEA:
−
* EC Number : 1.3.99.2
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24801 24801]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* EC Number : 2.6.1.42
−
{{#set: common name=Acyl CoA dehydrogenase  isobutyryl CoA }}
+
* MetaNetX (MNX) Equation : MNXR96228
−
{{#set: gene associated=B471_RS0108385}}
+
* KEGG Reaction : R02199
−
{{#set: in pathway=}}
+
* BioCyc : META:BRANCHED-CHAINAMINOTRANSFERILEU-RXN
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Isoleucine transaminase}}
 +
{{#set: gene associated=B471_RS0110105|B471_RS0102340|B471_RS0106435|B471_RS0109150}}
 +
{{#set: in pathway=map01100|map01110|map00770|map00290|map01210|map00270|map01230|map00966|map01130|map00280}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=bsubtilis}}
 

Revision as of 00:41, 21 March 2018

Reaction ILETA

  • direction:
    • REVERSIBLE
  • common name:
    • Isoleucine transaminase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 2-Oxoglutarate[c] + 1.0 L-Isoleucine[c] <=> 1.0 L-Glutamate[c] + 1.0 (S)-3-Methyl-2-oxopentanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.6.1.42
  • MetaNetX (MNX) Equation : MNXR96228
  • KEGG Reaction : R02199
  • BioCyc : META:BRANCHED-CHAINAMINOTRANSFERILEU-RXN




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