Difference between revisions of "ABUTD"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/pydx5p pydx5p] == * common name: ** Pyridoxal 5'-phosphate * Synonym(s): == Reaction(s) know...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ABUTD ABUTD] == * direction: ** LEFT-TO-RIGHT * common name: ** Aminobutyraldehyde dehydrogenase *...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/pydx5p pydx5p] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ABUTD ABUTD] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** Pyridoxal 5'-phosphate
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** Aminobutyraldehyde dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[BIOMASS]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1.0 [[nad]][c] '''+''' 1.0 [[4abutn]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[nadh]][c] '''+''' 1.0 [[4abut]][c] '''+''' 2.0 [[h]][c]
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* [[PLPS]]
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* With common name(s):
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* [[PDX5PO2]]
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** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 4-Aminobutanal[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 4-Aminobutanoate[c] '''+''' 2.0 H+[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[B471_RS0119455]]
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** Source: [[orthology-bsubtilis]]
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* Gene: [[B471_RS0115620]]
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** Source: [[orthology-bsubtilis]]
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== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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* [[map00310]]: [http://www.genome.jp/dbget-bin/www_bget?map00310 map00310]
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** '''12''' reactions found over '''138''' reactions in the full pathway
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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** '''212''' reactions found over '''1054''' reactions in the full pathway
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* [[map00561]]: [http://www.genome.jp/dbget-bin/www_bget?map00561 map00561]
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** '''9''' reactions found over '''83''' reactions in the full pathway
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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** '''101''' reactions found over '''715''' reactions in the full pathway
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* [[map00981]]: [http://www.genome.jp/dbget-bin/www_bget?map00981 map00981]
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** '''1''' reactions found over '''18''' reactions in the full pathway
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* [[map00340]]: [http://www.genome.jp/dbget-bin/www_bget?map00340 map00340]
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** '''13''' reactions found over '''90''' reactions in the full pathway
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* [[map00625]]: [http://www.genome.jp/dbget-bin/www_bget?map00625 map00625]
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** '''2''' reactions found over '''25''' reactions in the full pathway
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* [[map00903]]: [http://www.genome.jp/dbget-bin/www_bget?map00903 map00903]
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** '''2''' reactions found over '''30''' reactions in the full pathway
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* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
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** '''22''' reactions found over '''163''' reactions in the full pathway
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* [[map00380]]: [http://www.genome.jp/dbget-bin/www_bget?map00380 map00380]
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** '''11''' reactions found over '''163''' reactions in the full pathway
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* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
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** '''20''' reactions found over '''149''' reactions in the full pathway
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* [[map00053]]: [http://www.genome.jp/dbget-bin/www_bget?map00053 map00053]
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** '''3''' reactions found over '''50''' reactions in the full pathway
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* [[map00071]]: [http://www.genome.jp/dbget-bin/www_bget?map00071 map00071]
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** '''17''' reactions found over '''167''' reactions in the full pathway
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* [[map00280]]: [http://www.genome.jp/dbget-bin/www_bget?map00280 map00280]
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** '''16''' reactions found over '''155''' reactions in the full pathway
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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** '''148''' reactions found over '''694''' reactions in the full pathway
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* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
 +
** '''19''' reactions found over '''149''' reactions in the full pathway
 +
* [[map00410]]: [http://www.genome.jp/dbget-bin/www_bget?map00410 map00410]
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** '''9''' reactions found over '''91''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-bsubtilis]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=Pyridoxal 5'-phosphate}}
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* RHEA:
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{{#set: consumed by=BIOMASS}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19105 19105]
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{{#set: produced by=PLPS|PDX5PO2}}
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* EC Number : 1.2.1.-
 +
* MetaNetX (MNX) Equation : MNXR95191
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* KEGG Reaction : R02549
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* BioCyc : META:AMINOBUTDEHYDROG-RXN
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Aminobutyraldehyde dehydrogenase}}
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{{#set: gene associated=B471_RS0119455|B471_RS0115620}}
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{{#set: in pathway=map01100|map00310|map01110|map00561|map01120|map00981|map00340|map00625|map00903|map00620|map00380|map00010|map00053|map00071|map00280|map01130|map00330|map00410}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-bsubtilis}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:45, 21 March 2018

Reaction ABUTD

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Aminobutyraldehyde dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 4-Aminobutanal[c] + 1.0 H2O H2O[c] => 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 4-Aminobutanoate[c] + 2.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 1.2.1.-
  • MetaNetX (MNX) Equation : MNXR95191
  • KEGG Reaction : R02549
  • BioCyc : META:AMINOBUTDEHYDROG-RXN




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