Difference between revisions of "ACOAD1"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00280 map00280] == * common_name: ** Valine, leucine and isoleucine degradation * Synonym(s): == R...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACOAD1 ACOAD1] == * direction: ** REVERSIBLE * common name: ** Acyl-CoA dehydrogenase (butanoyl-CoA...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00280 map00280] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACOAD1 ACOAD1] ==
−
* common_name:
+
* direction:
−
** Valine, leucine and isoleucine degradation
+
** REVERSIBLE
 +
* common name:
 +
** Acyl-CoA dehydrogenase (butanoyl-CoA)
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''16''' reactions found over '''155''' reactions in the full pathway
+
* With identifiers:
−
* [[ABUTD]]
+
** 1.0 [[b2coa]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[nadh]][c] '''<=>''' 1.0 [[nad]][c] '''+''' 1.0 [[btcoa]][c]
−
** 2 associated gene(s):
+
* With common name(s):
−
*** [[B471_RS0119455]]
+
** 1.0 Crotonoyl-CoA[c] '''+''' 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''<=>''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Butanoyl-CoA[c]
−
*** [[B471_RS0115620]]
+
 
−
** 1 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
−
*** [[orthology-bsubtilis]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[ACACT1r]]
+
* Gene: [[B471_RS0108385]]
−
** 1 associated gene(s):
+
** Source: [[orthology-bsubtilis]]
−
*** [[B471_RS0105350]]
+
* Gene: [[B471_RS0110365]]
−
** 1 reconstruction source(s) associated:
+
** Source: [[orthology-bsubtilis]]
−
*** [[orthology-bsubtilis]]
+
== Pathways  ==
−
* [[ACACT2r]]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** 2 associated gene(s):
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
*** [[B471_RS0110565]]
+
* [[map00310]]: [http://www.genome.jp/dbget-bin/www_bget?map00310 map00310]
−
*** [[B471_RS0115615]]
+
** '''12''' reactions found over '''138''' reactions in the full pathway
−
** 1 reconstruction source(s) associated:
+
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
−
*** [[orthology-bsubtilis]]
+
** '''51''' reactions found over '''220''' reactions in the full pathway
−
* [[ACACT3r]]
+
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
−
** 2 associated gene(s):
+
** '''101''' reactions found over '''715''' reactions in the full pathway
−
*** [[B471_RS0110565]]
+
* [[map00650]]: [http://www.genome.jp/dbget-bin/www_bget?map00650 map00650]
−
*** [[B471_RS0115615]]
+
** '''21''' reactions found over '''156''' reactions in the full pathway
−
** 1 reconstruction source(s) associated:
+
== Reconstruction information  ==
−
*** [[orthology-bsubtilis]]
+
* Category: [[orthology]]
−
* [[ACACT4r]]
+
** Source: [[orthology-bsubtilis]]
−
** 2 associated gene(s):
+
*** Tool: [[pantograph]]
−
*** [[B471_RS0110565]]
+
−
*** [[B471_RS0115615]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[ACACT7r]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0115615]]
+
−
*** [[B471_RS0110565]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[ASPO1]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS23075]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[ECOAH9ir]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0115580]]
+
−
*** [[B471_RS0110785]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[HACD1]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[manual-reaction_to_add_delete]]
+
−
* [[HMGL]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0108405]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[ILETA]]
+
−
** 4 associated gene(s):
+
−
*** [[B471_RS0110105]]
+
−
*** [[B471_RS0102340]]
+
−
*** [[B471_RS0106435]]
+
−
*** [[B471_RS0109150]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[LEUTA]]
+
−
** 4 associated gene(s):
+
−
*** [[B471_RS0106435]]
+
−
*** [[B471_RS0110105]]
+
−
*** [[B471_RS0102340]]
+
−
*** [[B471_RS0109150]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[MACCOAT]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0115615]]
+
−
*** [[B471_RS0110565]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[OCOAT1]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0115600]]
+
−
*** [[B471_RS0115595]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[PPCOAC]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0108915]]
+
−
*** [[B471_RS0108400]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[VALTA]]
+
−
** 4 associated gene(s):
+
−
*** [[B471_RS0109150]]
+
−
*** [[B471_RS0110105]]
+
−
*** [[B471_RS0106435]]
+
−
*** [[B471_RS0102340]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
== Reaction(s) not found ==
+
−
* [http://bigg.ucsd.edu/universal/reactions/3HBCOAHL 3HBCOAHL]
+
−
* [http://bigg.ucsd.edu/universal/reactions/3HBCOAHLm 3HBCOAHLm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/3HOPCD 3HOPCD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/4ABUTD 4ABUTD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/4M2OPLOXRD 4M2OPLOXRD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTO2OX 5HOXINDACTO2OX]
+
−
* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOX 5HOXINDACTOX]
+
−
* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOXm 5HOXINDACTOXm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AACOAT AACOAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ABOR ABOR]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ABUTDm ABUTDm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT10m ACACT10m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT1m ACACT1m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT1x ACACT1x]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT2 ACACT2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT2m ACACT2m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT3 ACACT3]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT3m ACACT3m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT4m ACACT4m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT4p ACACT4p]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT5m ACACT5m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT5p ACACT5p]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT5r ACACT5r]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT6m ACACT6m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT6p ACACT6p]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT6r ACACT6r]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT7m ACACT7m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACACT7p ACACT7p]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACOAD8m ACOAD8m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ALDD20x ALDD20x]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ALDD20xm ALDD20xm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ALDH ALDH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/APATr APATr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASPOm ASPOm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/BCTA_glu_h BCTA_glu_h]
+
−
* [http://bigg.ucsd.edu/universal/reactions/BCTA_val_h BCTA_val_h]
+
−
* [http://bigg.ucsd.edu/universal/reactions/BCTAh BCTAh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLm C2M26DCOAHLm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLx C2M26DCOAHLx]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CITALALDOR CITALALDOR]
+
−
* [http://bigg.ucsd.edu/universal/reactions/D3AIBTm D3AIBTm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DHACOAH DHACOAH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DHRT_2mbcoa DHRT_2mbcoa]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DHRT_ivcoa DHRT_ivcoa]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ECH_3hivcoa ECH_3hivcoa]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH11p ECOAH11p]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH12 ECOAH12]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH12m ECOAH12m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH9m ECOAH9m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GCC2cm GCC2cm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GCCc GCCc]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GCCcm GCCcm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLACO GLACO]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLACOm GLACOm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLYALDDr GLYALDDr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD10p HACD10p]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD1_1 HACD1_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD1i HACD1i]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD1m HACD1m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD1x HACD1x]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD2 HACD2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD2_1 HACD2_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD2i HACD2i]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD2m HACD2m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD3 HACD3]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD3_1 HACD3_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD3i HACD3i]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD3m HACD3m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD4 HACD4]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD4i HACD4i]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD4m HACD4m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD4p HACD4p]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD5 HACD5]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD5i HACD5i]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD5m HACD5m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD5p HACD5p]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD6 HACD6]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD6i HACD6i]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD6m HACD6m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD6p HACD6p]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD7 HACD7]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD7i HACD7i]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD7m HACD7m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD7p HACD7p]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD9 HACD9]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACD9m HACD9m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACDp HACDp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HADPCOADH3 HADPCOADH3]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HBCO_nadp HBCO_nadp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HBCO_nadp_m HBCO_nadp_m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HIBDkt HIBDkt]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HIBDm HIBDm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HIBH HIBH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HMGCOAS HMGCOAS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HMGCOASm HMGCOASm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HMGL_1 HMGL_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HMGLm HMGLm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HMGLx HMGLx]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HMNO HMNO]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ILETAm ILETAm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/IMACTD IMACTD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/IMACTD_m IMACTD_m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/KAT1 KAT1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/KATp KATp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LEUTAi LEUTAi]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LEUTAm LEUTAm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MBCOAi MBCOAi]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MCCC MCCC]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MCCCrm MCCCrm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MCTC MCTC]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MGCH MGCH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MGCHrm MGCHrm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MHGS MHGS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MME MME]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMEm MMEm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMM2 MMM2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMMm MMMm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMSAD1 MMSAD1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMSAD1m MMSAD1m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMSAD3 MMSAD3]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMSAD3m MMSAD3m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMSDH MMSDH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MMTSAO MMTSAO]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MOD MOD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MOD_3mhtpp MOD_3mhtpp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MOD_3mop MOD_3mop]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MOD_4mop MOD_4mop]
+
−
* [http://bigg.ucsd.edu/universal/reactions/NABTNO NABTNO]
+
−
* [http://bigg.ucsd.edu/universal/reactions/NABTNOm NABTNOm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OCOAT1m OCOAT1m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OGCOAAT OGCOAAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PDHcr PDHcr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PDHe3hr PDHe3hr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PPCOACm PPCOACm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PYLALDOX PYLALDOX]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PYLALDOXm PYLALDOXm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLm T2M26DCOAHLm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLx T2M26DCOAHLx]
+
−
* [http://bigg.ucsd.edu/universal/reactions/VALTAim VALTAim]
+
 
== External links  ==
 
== External links  ==
−
{{#set: common_name=Valine, leucine and isoleucine degradation}}
+
* EC Number : 1.3.1.44
−
{{#set: reaction found=16}}
+
* MetaNetX (MNX) Equation : MNXR95305
−
{{#set: total reaction=155}}
+
* KEGG Reaction : R01171
−
{{#set: completion rate=10.0}}
+
* BioCyc : META:RXN-12558
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Acyl-CoA dehydrogenase (butanoyl-CoA)}}
 +
{{#set: gene associated=B471_RS0108385|B471_RS0110365}}
 +
{{#set: in pathway=map01100|map00310|map01200|map01120|map00650}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:38, 21 March 2018

Reaction ACOAD1

  • direction:
    • REVERSIBLE
  • common name:
    • Acyl-CoA dehydrogenase (butanoyl-CoA)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Crotonoyl-CoA[c] + 1.0 H+[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c] <=> 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 Butanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 1.3.1.44
  • MetaNetX (MNX) Equation : MNXR95305
  • KEGG Reaction : R01171
  • BioCyc : META:RXN-12558




Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=ACOAD1&oldid=7556"