Difference between revisions of "ACONT"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900] == * common_name: ** Terpenoid backbone biosynthesis * Synonym(s): == Reaction(s)...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACONT ACONT] == * direction: ** REVERSIBLE * common name: ** Aconitate hydratase * Synonym(s): ==...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ACONT ACONT] ==
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* common_name:
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* direction:
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** Terpenoid backbone biosynthesis
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** REVERSIBLE
 +
* common name:
 +
** Aconitate hydratase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''16''' reactions found over '''67''' reactions in the full pathway
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* With identifiers:
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* [[ACACT1r]]
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** 1.0 [[cit]][c] '''<=>''' 1.0 [[icit]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[B471_RS0105350]]
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** 1.0 Citrate[c] '''<=>''' 1.0 Isocitrate[c]
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** 1 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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== Genes associated with this reaction  ==
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* [[ACACT2r]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 associated gene(s):
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* Gene: [[B471_RS0105965]]
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*** [[B471_RS0110565]]
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** Source: [[orthology-cljungdahlii]]
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*** [[B471_RS0115615]]
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** Source: [[orthology-bsubtilis]]
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[orthology-bsubtilis]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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* [[ACACT3r]]
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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** 2 associated gene(s):
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* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
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*** [[B471_RS0110565]]
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** '''23''' reactions found over '''129''' reactions in the full pathway
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*** [[B471_RS0115615]]
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* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
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** 1 reconstruction source(s) associated:
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** '''25''' reactions found over '''157''' reactions in the full pathway
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*** [[orthology-bsubtilis]]
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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* [[ACACT4r]]
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** '''101''' reactions found over '''715''' reactions in the full pathway
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** 2 associated gene(s):
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* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
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*** [[B471_RS0110565]]
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** '''26''' reactions found over '''80''' reactions in the full pathway
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*** [[B471_RS0115615]]
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* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
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** 1 reconstruction source(s) associated:
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** '''51''' reactions found over '''220''' reactions in the full pathway
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*** [[orthology-bsubtilis]]
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* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
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* [[ACACT7r]]
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** '''78''' reactions found over '''228''' reactions in the full pathway
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** 2 associated gene(s):
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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*** [[B471_RS0115615]]
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** '''212''' reactions found over '''1054''' reactions in the full pathway
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*** [[B471_RS0110565]]
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* [[map00020]]: [http://www.genome.jp/dbget-bin/www_bget?map00020 map00020]
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** 1 reconstruction source(s) associated:
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** '''10''' reactions found over '''70''' reactions in the full pathway
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*** [[orthology-bsubtilis]]
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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* [[CDPMEK]]
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** '''148''' reactions found over '''694''' reactions in the full pathway
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** 1 associated gene(s):
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== Reconstruction information  ==
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*** [[B471_RS0107420]]
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* Category: [[orthology]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** Tool: [[pantograph]]
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* [[DMATT]]
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** Source: [[orthology-bsubtilis]]
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** 1 associated gene(s):
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*** Tool: [[pantograph]]
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*** [[B471_RS0101825]]
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** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
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−
*** [[orthology-bsubtilis]]
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−
* [[DMPPS]]
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** 1 associated gene(s):
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*** [[B471_RS0105795]]
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** 1 reconstruction source(s) associated:
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−
*** [[orthology-bsubtilis]]
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* [[DXPRIi]]
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** 1 associated gene(s):
+
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*** [[B471_RS0100735]]
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** 2 reconstruction source(s) associated:
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−
*** [[orthology-bsubtilis]]
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−
*** [[orthology-aferrooxidans]]
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* [[DXPS]]
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** 1 associated gene(s):
+
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*** [[B471_RS0101820]]
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** 2 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
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−
*** [[orthology-aferrooxidans]]
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* [[FRTT]]
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** 1 associated gene(s):
+
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*** [[B471_RS0101825]]
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** 1 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
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* [[GRTT]]
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** 1 associated gene(s):
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*** [[B471_RS0101825]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[MACCOAT]]
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** 2 associated gene(s):
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*** [[B471_RS0115615]]
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*** [[B471_RS0110565]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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* [[MECDPS]]
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** 1 associated gene(s):
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*** [[B471_RS0104100]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[MEPCT]]
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** 1 associated gene(s):
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*** [[B471_RS0104105]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[OCTDPS]]
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** 1 associated gene(s):
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*** [[B471_RS0105645]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-aferrooxidans]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/ACACT10m ACACT10m]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT1m ACACT1m]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT1x ACACT1x]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT2 ACACT2]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT2m ACACT2m]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT3 ACACT3]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT3m ACACT3m]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT4m ACACT4m]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT4p ACACT4p]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT5m ACACT5m]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT5p ACACT5p]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT5r ACACT5r]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT6m ACACT6m]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT6p ACACT6p]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT6r ACACT6r]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT7m ACACT7m]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT7p ACACT7p]
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* [http://bigg.ucsd.edu/universal/reactions/CMK CMK]
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* [http://bigg.ucsd.edu/universal/reactions/CMS CMS]
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* [http://bigg.ucsd.edu/universal/reactions/DMATTx DMATTx]
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* [http://bigg.ucsd.edu/universal/reactions/DPMVD DPMVD]
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* [http://bigg.ucsd.edu/universal/reactions/DPMVDx DPMVDx]
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* [http://bigg.ucsd.edu/universal/reactions/DPPS DPPS]
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* [http://bigg.ucsd.edu/universal/reactions/DXRI DXRI]
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* [http://bigg.ucsd.edu/universal/reactions/DXS DXS]
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* [http://bigg.ucsd.edu/universal/reactions/FPPSh FPPSh]
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* [http://bigg.ucsd.edu/universal/reactions/GGDPR GGDPR]
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* [http://bigg.ucsd.edu/universal/reactions/GGDR GGDR]
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* [http://bigg.ucsd.edu/universal/reactions/GGPS_1 GGPS_1]
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* [http://bigg.ucsd.edu/universal/reactions/GPPSh GPPSh]
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* [http://bigg.ucsd.edu/universal/reactions/GRTTx GRTTx]
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* [http://bigg.ucsd.edu/universal/reactions/HMGCOAR HMGCOAR]
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* [http://bigg.ucsd.edu/universal/reactions/HMGCOARr HMGCOARr]
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* [http://bigg.ucsd.edu/universal/reactions/HMGCOARx HMGCOARx]
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* [http://bigg.ucsd.edu/universal/reactions/HMGCOAS HMGCOAS]
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* [http://bigg.ucsd.edu/universal/reactions/HMGCOASm HMGCOASm]
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* [http://bigg.ucsd.edu/universal/reactions/IDIh IDIh]
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* [http://bigg.ucsd.edu/universal/reactions/IDS1 IDS1]
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* [http://bigg.ucsd.edu/universal/reactions/IPDDI IPDDI]
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* [http://bigg.ucsd.edu/universal/reactions/IPDDIx IPDDIx]
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* [http://bigg.ucsd.edu/universal/reactions/IPDPS_syn IPDPS_syn]
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−
* [http://bigg.ucsd.edu/universal/reactions/KAT1 KAT1]
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* [http://bigg.ucsd.edu/universal/reactions/MCS MCS]
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−
* [http://bigg.ucsd.edu/universal/reactions/MEVK1 MEVK1]
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* [http://bigg.ucsd.edu/universal/reactions/MEVK1x MEVK1x]
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−
* [http://bigg.ucsd.edu/universal/reactions/MEVK2 MEVK2]
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−
* [http://bigg.ucsd.edu/universal/reactions/MEVK3 MEVK3]
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−
* [http://bigg.ucsd.edu/universal/reactions/MEVK4 MEVK4]
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−
* [http://bigg.ucsd.edu/universal/reactions/MHGS MHGS]
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−
* [http://bigg.ucsd.edu/universal/reactions/PMEVK PMEVK]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PMEVKx PMEVKx]
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== External links  ==
 
== External links  ==
−
{{#set: common_name=Terpenoid backbone biosynthesis}}
+
* RHEA:
−
{{#set: reaction found=16}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10336 10336]
−
{{#set: total reaction=67}}
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* MetaNetX (MNX) Equation : MNXR95384
−
{{#set: completion rate=24.0}}
+
* KEGG Reaction : R01324
 +
* EC Number : 4.2.1.3
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Aconitate hydratase}}
 +
{{#set: gene associated=B471_RS0105965}}
 +
{{#set: in pathway=map01100|map00630|map00720|map01120|map01210|map01200|map01230|map01110|map00020|map01130}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:37, 21 March 2018

Reaction ACONT

  • direction:
    • REVERSIBLE
  • common name:
    • Aconitate hydratase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Citrate[c] <=> 1.0 Isocitrate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR95384
  • KEGG Reaction : R01324
  • EC Number : 4.2.1.3




Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=ACONT&oldid=7497"