Difference between revisions of "ADSL1r CUT"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK6 NDPK6] == * direction: ** REVERSIBLE * common name: ** Nucleoside-diphosphate kinase (ATP:dUD...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ADSL1r_CUT ADSL1r_CUT] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * Wit...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK6 NDPK6] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ADSL1r_CUT ADSL1r_CUT] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
* common name:
+
** Nucleoside-diphosphate kinase (ATP:dUDP)
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[dudp]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[dutp]][c] '''+''' 1.0 [[adp]][c]
+
** 1.0 [[dcamp]][c] '''=>''' 1.0 [[amp]][c] '''+''' 1.0 [[fum]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 DUDP C9H11N2O11P2[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 DUTP C9H11N2O14P3[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
+
** 1.0 N6-(1,2-Dicarboxyethyl)-AMP[c] '''=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 Fumarate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS0100900]]
+
* Gene: [[B471_RS0105285]]
** [[pantograph]]-[[bsubtilis]]
+
** Source: [[manual-missing_rxn_creator]]
 
== Pathways  ==
 
== Pathways  ==
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
** '''68''' reactions found over '''244''' reactions in the full pathway
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''471''' reactions found over '''2349''' reactions in the full pathway
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
** '''64''' reactions found over '''298''' reactions in the full pathway
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''148''' reactions found over '''694''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
+
* Category: [[manual]]
** Source: [[orthology-bsubtilis]]
+
** Source: [[manual-missing_rxn_creator]]
*** Tool: [[pantograph]]
+
*** Comment: [[reaction found from orthology but we fixed reversibility based on biological expertise]]
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28582 28582]
+
{{#set: gene associated=B471_RS0105285}}
* EC Number : 2.7.4.6
+
{{#set: in pathway=}}
* MetaNetX (MNX) Equation : MNXR101938
+
{{#set: reconstruction category=manual}}
* KEGG Reaction : R02331
+
{{#set: reconstruction source=manual-missing_rxn_creator}}
* BioCyc : META:DUDPKIN-RXN
+
{{#set: reconstruction comment=reaction found from orthology but we fixed reversibility based on biological expertise}}
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=Nucleoside-diphosphate kinase (ATP:dUDP)}}
+
{{#set: gene associated=B471_RS0100900}}
+
{{#set: in pathway=map00240|map01100|map01110|map00230|map01130}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=orthology-bsubtilis}}
+
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 16:37, 21 March 2018

Reaction ADSL1r_CUT

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 N6-(1,2-Dicarboxyethyl)-AMP[c] => 1.0 AMP C10H12N5O7P[c] + 1.0 Fumarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links