Difference between revisions of "ARGSL"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TECAS_CL TECAS_CL] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycerol techoic acid synthes...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ARGSL ARGSL] == * direction: ** REVERSIBLE * common name: ** Argininosuccinate lyase * Synonym(s):...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/TECAS_CL TECAS_CL] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ARGSL ARGSL] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Glycerol techoic acid synthesis (D-ala, n=25)
+
** Argininosuccinate lyase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 25.0 [[cdpglyc]][c] '''+''' 1.0 [[uacmam]][c] '''+''' 25.0 [[atp]][c] '''+''' 25.0 [[ala__D]][c] '''=>''' 25.0 [[cmp]][c] '''+''' 1.0 [[udp]][c] '''+''' 1.0 [[teca_CL]][c] '''+''' 25.0 [[ppi]][c] '''+''' 26.0 [[h]][c] '''+''' 25.0 [[amp]][c]
+
** 1.0 [[argsuc]][c] '''<=>''' 1.0 [[arg__L]][c] '''+''' 1.0 [[fum]][c]
 
* With common name(s):
 
* With common name(s):
−
** 25.0 CDPglycerol C12H19N3O13P2[c] '''+''' 1.0 UDP-N-acetyl-D-mannosamine[c] '''+''' 25.0 ATP C10H12N5O13P3[c] '''+''' 25.0 D-Alanine[c] '''=>''' 25.0 CMP C9H12N3O8P[c] '''+''' 1.0 UDP C9H11N2O12P2[c] '''+''' 1.0 Glycerol teichoic acid (n=25), unlinked, D-ala (specific CL)[c] '''+''' 25.0 Diphosphate[c] '''+''' 26.0 H+[c] '''+''' 25.0 AMP C10H12N5O7P[c]
+
** 1.0 N(omega)-(L-Arginino)succinate[c] '''<=>''' 1.0 L-Arginine[c] '''+''' 1.0 Fumarate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[B471_RS23380]]
 +
** Source: [[orthology-cljungdahlii]]
 +
** Source: [[orthology-bsubtilis]]
 +
** Source: [[orthology-aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00220]]: [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220]
 +
** '''13''' reactions found over '''65''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 +
* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
 +
** '''22''' reactions found over '''93''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[orthology]]
−
** [[reaction added from literature evidence or biological expertise]]
+
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR104775
+
* EC Number : 4.3.2.1
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* BioCyc : META:ARGSUCCINLYA-RXN
−
{{#set: common name=Glycerol techoic acid synthesis (D-ala, n=25)}}
+
* MetaNetX (MNX) Equation : MNXR95948
−
{{#set: in pathway=}}
+
* RHEA:
−
{{#set: reconstruction category=manual}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24020 24020]
−
{{#set: reconstruction source=reaction added from literature evidence or biological expertise}}
+
* Reactome : REACT_R-ATH-70573
 +
* KEGG Reaction : R01086
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Argininosuccinate lyase}}
 +
{{#set: gene associated=B471_RS23380}}
 +
{{#set: in pathway=map01100|map00220|map01110|map01230|map00250|map01130}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:44, 21 March 2018

Reaction ARGSL

  • direction:
    • REVERSIBLE
  • common name:
    • Argininosuccinate lyase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 N(omega)-(L-Arginino)succinate[c] <=> 1.0 L-Arginine[c] + 1.0 Fumarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 4.3.2.1
  • BioCyc : META:ARGSUCCINLYA-RXN
  • MetaNetX (MNX) Equation : MNXR95948
  • RHEA:
  • Reactome : REACT_R-ATH-70573
  • KEGG Reaction : R01086




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