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| − | [[Category:Pathway]] | + | [[Category:Reaction]] |
| − | == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00920 map00920] == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/ASPt2r_CUT ASPt2r_CUT] == |
| − | * common_name: | + | * direction: |
| − | ** Sulfur metabolism | + | ** LEFT-TO-RIGHT |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction(s) found == | + | == Reaction Formula == |
| − | '''5''' reactions found over '''56''' reactions in the full pathway
| + | * With identifiers: |
| − | * [[BPNT]] | + | ** 1.0 [[h]][e] '''+''' 1.0 [[asp__L]][e] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[asp__L]][c] |
| − | ** 1 associated gene(s):
| + | * With common name(s): |
| − | *** [[B471_RS0101420]]
| + | ** 1.0 H+[e] '''+''' 1.0 L-Aspartate[e] '''=>''' 1.0 H+[c] '''+''' 1.0 L-Aspartate[c] |
| − | ** 1 reconstruction source(s) associated: | + | |
| − | *** [[orthology-aferrooxidans]]
| + | == Genes associated with this reaction == |
| − | * [[CYSS]]
| + | == Pathways == |
| − | ** 3 associated gene(s):
| + | == Reconstruction information == |
| − | *** [[B471_RS0106095]]
| + | * Category: [[manual]] |
| − | *** [[B471_RS0104440]]
| + | ** Source: [[manual-missing_rxn_creator]] |
| − | *** [[B471_RS0108360]]
| + | *** Comment: [[reaction found from orthology but we fixed reversibility based on biological expertise]] |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-cljungdahlii]]
| + | |
| − | *** [[orthology-aferrooxidans]]
| + | |
| − | * [[SERAT]]
| + | |
| − | ** 1 associated gene(s): | + | |
| − | *** [[B471_RS0118445]] | + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-cljungdahlii]]
| + | |
| − | *** [[orthology-bsubtilis]]
| + | |
| − | *** [[orthology-aferrooxidans]]
| + | |
| − | * [[SHSL2r]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[B471_RS20990]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-cljungdahlii]]
| + | |
| − | * [[TAURabc]]
| + | |
| − | ** 4 associated gene(s):
| + | |
| − | *** [[B471_RS0116265]]
| + | |
| − | *** [[B471_RS0114570]]
| + | |
| − | *** [[B471_RS0116270]]
| + | |
| − | *** [[B471_RS0114565]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-bsubtilis]]
| + | |
| − | == Reaction(s) not found == | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/AASPh AASPh] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/AASPm AASPm]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/ACHMSSELCYSL ACHMSSELCYSL]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/ACHMSSELCYSLh ACHMSSELCYSLh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/ACSERL ACSERL] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/ACSERLh ACSERLh] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/ACSERLm ACSERLm]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/ACSERSULL ACSERSULL]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/ACSERSULLh ACSERSULLh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/ACSERSULLm ACSERSULLm] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/ADSELK ADSELK] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/ADSK ADSK] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/AHSL AHSL]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/BPNT2 BPNT2]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/CYANST CYANST]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/CYANSTm CYANSTm]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/CYANSTpp CYANSTpp]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/CYSS_1 CYSS_1]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/FDMO FDMO]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/FDMO2 FDMO2]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/FDMO4 FDMO4]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/HSST HSST]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/METB1 METB1]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PAPSR PAPSR]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PAPSR2 PAPSR2]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PAPSSH PAPSSH]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SADT SADT]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SADT2 SADT2]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SAT SAT]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SATm SATm]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SELADT SELADT]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SHSL1 SHSL1]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SHSL1h SHSL1h]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SHSL2h SHSL2h]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SLCYSS SLCYSS]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SLFAT SLFAT]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SO3R SO3R]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SUCHMSSELCYSL SUCHMSSELCYSL]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SUCHMSSELCYSLh SUCHMSSELCYSLh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SULFOX SULFOX]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SULO SULO]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SULOm SULOm]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SULR SULR]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SULabc SULabc]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/SULabcpp SULabcpp]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/TAUDO TAUDO]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/TAURabcpp TAURabcpp]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/TSULabc TSULabc]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/TSULabcpp TSULabcpp]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/TSULth TSULth]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/TSULtm TSULtm]
| + | |
| | == External links == | | == External links == |
| − | {{#set: common_name=Sulfur metabolism}} | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: reaction found=5}} | + | {{#set: in pathway=}} |
| − | {{#set: total reaction=56}} | + | {{#set: reconstruction category=manual}} |
| − | {{#set: completion rate=9.0}} | + | {{#set: reconstruction source=manual-missing_rxn_creator}} |
| | + | {{#set: reconstruction comment=reaction found from orthology but we fixed reversibility based on biological expertise}} |
