Difference between revisions of "Ac"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UAMAGS UAMAGS] == * direction: ** LEFT-TO-RIGHT * common name: ** UDP-N-acetylmuramoyl-L-alanyl-D-g...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SERt2r SERt2r] == * direction: ** REVERSIBLE * common name: ** L serine reversible transport via pr...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/UAMAGS UAMAGS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/SERt2r SERt2r] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
+
** L serine reversible transport via proton symport
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[uama]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[glu__D]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[uamag]][c]
+
** 1.0 [[h]][e] '''+''' 1.0 [[ser__L]][e] '''<=>''' 1.0 [[ser__L]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 UDP-N-acetylmuramoyl-L-alanine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 D-Glutamate[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate[c]
+
** 1.0 H+[e] '''+''' 1.0 L-Serine[e] '''<=>''' 1.0 L-Serine[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0109185]]
+
* [[B471_RS0101195]]
 +
** [[pantograph]]-[[cljungdahlii]]
 +
* [[B471_RS0105160]]
 
** [[pantograph]]-[[cljungdahlii]]
 
** [[pantograph]]-[[cljungdahlii]]
−
** [[pantograph]]-[[bsubtilis]]
 
−
** [[pantograph]]-[[aferrooxidans]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map00471]]: [http://www.genome.jp/dbget-bin/www_bget?map00471 map00471]
 
−
** '''3''' reactions found over '''10''' reactions in the full pathway
 
−
* [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550]
 
−
** '''14''' reactions found over '''27''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[aferrooxidans]]
+
*** Tool: [[pantograph]]
−
*** [[cljungdahlii]]
+
−
*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16429 16429]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28887 28887]
−
* BioCyc : META:UDP-NACMURALA-GLU-LIG-RXN
+
* MetaNetX (MNX) Equation : MNXR104352
−
* MetaNetX (MNX) Equation : MNXR105038
+
* BioCyc : META:TRANS-RXN-71
−
* KEGG Reaction : R02783
+
{{#set: direction=REVERSIBLE}}
−
* EC Number : 6.3.2.9
+
{{#set: common name=L serine reversible transport via proton symport}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: gene associated=B471_RS0101195|B471_RS0105160}}
−
{{#set: common name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=B471_RS0109185}}
+
−
{{#set: in pathway=map01100|map00471|map00550}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=aferrooxidans|cljungdahlii|bsubtilis}}
 

Revision as of 00:34, 21 March 2018

Reaction SERt2r

  • direction:
    • REVERSIBLE
  • common name:
    • L serine reversible transport via proton symport
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[e] + 1.0 L-Serine[e] <=> 1.0 L-Serine[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR104352
  • BioCyc : META:TRANS-RXN-71




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