Difference between revisions of "Accoa"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/G6PDH2r G6PDH2r] == * direction: ** REVERSIBLE * common name: ** Glucose 6-phosphate dehydrogenase...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DXPRIi DXPRIi] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-deoxy-D-xylulose reductoisomera...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/G6PDH2r G6PDH2r] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/DXPRIi DXPRIi] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Glucose 6-phosphate dehydrogenase
+
** 1-deoxy-D-xylulose reductoisomerase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[g6p]][c] '''+''' 1.0 [[nadp]][c] '''<=>''' 1.0 [[nadph]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[6pgl]][c]
+
** 1.0 [[nadph]][c] '''+''' 1.0 [[dxyl5p]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[2me4p]][c] '''+''' 1.0 [[nadp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 D-Glucose 6-phosphate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''<=>''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 H+[c] '''+''' 1.0 6-phospho-D-glucono-1,5-lactone[c]
+
** 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 1-deoxy-D-xylulose 5-phosphate[c] '''+''' 1.0 H+[c] '''=>''' 1.0 2-C-methyl-D-erythritol 4-phosphate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0108275]]
+
* [[B471_RS0100735]]
 
** [[pantograph]]-[[bsubtilis]]
 
** [[pantograph]]-[[bsubtilis]]
 +
** [[pantograph]]-[[aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''148''' reactions found over '''694''' reactions in the full pathway
 
** '''148''' reactions found over '''694''' reactions in the full pathway
−
* [[map00480]]: [http://www.genome.jp/dbget-bin/www_bget?map00480 map00480]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''10''' reactions found over '''39''' reactions in the full pathway
+
** '''212''' reactions found over '''1054''' reactions in the full pathway
−
* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
+
* [[map00900]]: [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900]
−
** '''20''' reactions found over '''69''' reactions in the full pathway
+
** '''16''' reactions found over '''67''' reactions in the full pathway
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-bsubtilis]]
−
*** [[bsubtilis]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15841 15841]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13717 13717]
−
* BioCyc : META:GLU6PDEHYDROG-RXN
+
* EC Number : 1.1.1.267
−
* MetaNetX (MNX) Equation : MNXR99907
+
* MetaNetX (MNX) Equation : MNXR97830
−
* KEGG Reaction : R00835
+
* KEGG Reaction : R05688
−
* EC Number : 1.1.1.363
+
* BioCyc : META:DXPREDISOM-RXN
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Glucose 6-phosphate dehydrogenase}}
+
{{#set: common name=1-deoxy-D-xylulose reductoisomerase}}
−
{{#set: gene associated=B471_RS0108275}}
+
{{#set: gene associated=B471_RS0100735}}
−
{{#set: in pathway=map01110|map01130|map00480|map00030|map01100}}
+
{{#set: in pathway=map01100|map01130|map01110|map00900}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=bsubtilis}}
 

Revision as of 00:32, 21 March 2018

Reaction DXPRIi

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 1-deoxy-D-xylulose reductoisomerase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] + 1.0 1-deoxy-D-xylulose 5-phosphate[c] + 1.0 H+[c] => 1.0 2-C-methyl-D-erythritol 4-phosphate[c] + 1.0 Nicotinamide adenine dinucleotide phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 1.1.1.267
  • MetaNetX (MNX) Equation : MNXR97830
  • KEGG Reaction : R05688
  • BioCyc : META:DXPREDISOM-RXN




Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=Accoa&oldid=3339"