Difference between revisions of "DAPE"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DM_amob DM_amob] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With iden...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DAPE DAPE] == * direction: ** REVERSIBLE * common name: ** Diaminopimelate epimerase * Synonym(s):...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/DAPE DAPE] == |
* direction: | * direction: | ||
| − | ** | + | ** REVERSIBLE |
| + | * common name: | ||
| + | ** Diaminopimelate epimerase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[26dap_LL]][c] '''<=>''' 1.0 [[26dap__M]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 LL-2,6-Diaminoheptanedioate[c] '''<=>''' 1.0 Meso-2,6-Diaminoheptanedioate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[B471_RS0109300]] | ||
| + | ** Source: [[orthology-cljungdahlii]] | ||
| + | ** Source: [[orthology-bsubtilis]] | ||
| + | ** Source: [[orthology-aferrooxidans]] | ||
== Pathways == | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''471''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| + | ** '''212''' reactions found over '''1054''' reactions in the full pathway | ||
| + | * [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300] | ||
| + | ** '''10''' reactions found over '''34''' reactions in the full pathway | ||
| + | * [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120] | ||
| + | ** '''101''' reactions found over '''715''' reactions in the full pathway | ||
| + | * [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230] | ||
| + | ** '''78''' reactions found over '''228''' reactions in the full pathway | ||
| + | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130] | ||
| + | ** '''148''' reactions found over '''694''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-cljungdahlii]] |
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-bsubtilis]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-aferrooxidans]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: direction= | + | * RHEA: |
| − | {{#set: in pathway=}} | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15393 15393] |
| − | {{#set: reconstruction category= | + | * EC Number : 5.1.1.7 |
| − | {{#set: reconstruction source= | + | * MetaNetX (MNX) Equation : MNXR97143 |
| + | * KEGG Reaction : R02735 | ||
| + | * BioCyc : META:DIAMINOPIMEPIM-RXN | ||
| + | {{#set: direction=REVERSIBLE}} | ||
| + | {{#set: common name=Diaminopimelate epimerase}} | ||
| + | {{#set: gene associated=B471_RS0109300}} | ||
| + | {{#set: in pathway=map01100|map01110|map00300|map01120|map01230|map01130}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 16:36, 21 March 2018
Contents
Reaction DAPE
- direction:
- REVERSIBLE
- common name:
- Diaminopimelate epimerase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 LL-2,6-Diaminoheptanedioate[c] <=> 1.0 Meso-2,6-Diaminoheptanedioate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: B471_RS0109300
- Source: orthology-cljungdahlii
- Source: orthology-bsubtilis
- Source: orthology-aferrooxidans
Pathways
- map01100: map01100
- 471 reactions found over 2349 reactions in the full pathway
- map01110: map01110
- 212 reactions found over 1054 reactions in the full pathway
- map00300: map00300
- 10 reactions found over 34 reactions in the full pathway
- map01120: map01120
- 101 reactions found over 715 reactions in the full pathway
- map01230: map01230
- 78 reactions found over 228 reactions in the full pathway
- map01130: map01130
- 148 reactions found over 694 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-cljungdahlii
- Tool: pantograph
- Source: orthology-bsubtilis
- Tool: pantograph
- Source: orthology-aferrooxidans
- Tool: pantograph
- Source: orthology-cljungdahlii
External links
- RHEA:
- EC Number : 5.1.1.7
- MetaNetX (MNX) Equation : MNXR97143
- KEGG Reaction : R02735
- BioCyc : META:DIAMINOPIMEPIM-RXN
