Difference between revisions of "DHDPS"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00790 map00790] == * common_name: ** Folate biosynthesis * Synonym(s): == Reaction(s) found == ''...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DHDPS DHDPS] == * direction: ** LEFT-TO-RIGHT * common name: ** Dihydrodipicolinate synthase * Syno...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00790 map00790] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/DHDPS DHDPS] ==
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* common_name:
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* direction:
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** Folate biosynthesis
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** LEFT-TO-RIGHT
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* common name:
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** Dihydrodipicolinate synthase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''10''' reactions found over '''41''' reactions in the full pathway
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* With identifiers:
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* [[ADCL]]
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** 1.0 [[aspsa]][c] '''+''' 1.0 [[pyr]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[23dhdp]][c] '''+''' 2.0 [[h2o]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[B471_RS0109150]]
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** 1.0 L-Aspartate 4-semialdehyde[c] '''+''' 1.0 Pyruvate[c] '''=>''' 1.0 H+[c] '''+''' 1.0 2,3-Dihydrodipicolinate[c] '''+''' 2.0 H2O H2O[c]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aferrooxidans]]
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== Genes associated with this reaction  ==
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* [[ADCS]]
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Genes have been associated with this reaction based on different elements listed below.
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** 0 associated gene:
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* Gene: [[B471_RS0118135]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-cljungdahlii]]
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*** [[manual-reaction_to_add_delete]]
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** Source: [[orthology-bsubtilis]]
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* [[DHFR]]
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** Source: [[orthology-aferrooxidans]]
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** 0 associated gene:
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* Gene: [[B471_RS20130]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-cljungdahlii]]
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*** [[manual-reaction_to_add_delete]]
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** Source: [[orthology-bsubtilis]]
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* [[DHFS]]
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** Source: [[orthology-aferrooxidans]]
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** 1 associated gene(s):
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== Pathways  ==
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*** [[B471_RS0119120]]
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* Category: [[orthology]]
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*** [[orthology-bsubtilis]]
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** Source: [[orthology-cljungdahlii]]
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*** [[orthology-aferrooxidans]]
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*** Tool: [[pantograph]]
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* [[DHPS2]]
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** Source: [[orthology-bsubtilis]]
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** 1 associated gene(s):
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*** Tool: [[pantograph]]
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*** [[B471_RS21520]]
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** Source: [[orthology-aferrooxidans]]
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** 2 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[orthology-cljungdahlii]]
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*** [[orthology-aferrooxidans]]
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* [[DNMPPA]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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* [[DNTPPA]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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* [[FOLR2]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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* [[GTPCI]]
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** 1 associated gene(s):
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*** [[B471_RS0118675]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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* [[THFGLUS]]
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** 1 associated gene(s):
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*** [[B471_RS0119120]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/10FTHFGLULL 10FTHFGLULL]
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* [http://bigg.ucsd.edu/universal/reactions/10FTHFGLULLm 10FTHFGLULLm]
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* [http://bigg.ucsd.edu/universal/reactions/AKP1 AKP1]
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* [http://bigg.ucsd.edu/universal/reactions/AKP1_1 AKP1_1]
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* [http://bigg.ucsd.edu/universal/reactions/CDGR CDGR]
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* [http://bigg.ucsd.edu/universal/reactions/CPH4S CPH4S]
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* [http://bigg.ucsd.edu/universal/reactions/CPMPS CPMPS]
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* [http://bigg.ucsd.edu/universal/reactions/DHFOR DHFOR]
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* [http://bigg.ucsd.edu/universal/reactions/DHFR2i DHFR2i]
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* [http://bigg.ucsd.edu/universal/reactions/DHFRim DHFRim]
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* [http://bigg.ucsd.edu/universal/reactions/DHFS_1 DHFS_1]
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* [http://bigg.ucsd.edu/universal/reactions/DHNPA2r DHNPA2r]
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* [http://bigg.ucsd.edu/universal/reactions/DHPR DHPR]
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* [http://bigg.ucsd.edu/universal/reactions/DHPS2_1 DHPS2_1]
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* [http://bigg.ucsd.edu/universal/reactions/DHPTDNR DHPTDNR]
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* [http://bigg.ucsd.edu/universal/reactions/DHPTDNRN DHPTDNRN]
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* [http://bigg.ucsd.edu/universal/reactions/DNTPPA_1 DNTPPA_1]
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* [http://bigg.ucsd.edu/universal/reactions/FOLR2_1 FOLR2_1]
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* [http://bigg.ucsd.edu/universal/reactions/FPGS_tm FPGS_tm]
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* [http://bigg.ucsd.edu/universal/reactions/GTPCI_1 GTPCI_1]
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* [http://bigg.ucsd.edu/universal/reactions/GTPCI_2 GTPCI_2]
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* [http://bigg.ucsd.edu/universal/reactions/GTPCIn GTPCIn]
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* [http://bigg.ucsd.edu/universal/reactions/H4MPTGL_atp H4MPTGL_atp]
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* [http://bigg.ucsd.edu/universal/reactions/HPPK2 HPPK2]
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* [http://bigg.ucsd.edu/universal/reactions/PTHPS PTHPS]
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* [http://bigg.ucsd.edu/universal/reactions/PTHPSn PTHPSn]
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* [http://bigg.ucsd.edu/universal/reactions/SPR SPR]
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* [http://bigg.ucsd.edu/universal/reactions/SPRn SPRn]
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* [http://bigg.ucsd.edu/universal/reactions/THFGLUS_1 THFGLUS_1]
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* [http://bigg.ucsd.edu/universal/reactions/THFOR1 THFOR1]
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* [http://bigg.ucsd.edu/universal/reactions/THFOR2 THFOR2]
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== External links  ==
 
== External links  ==
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{{#set: common_name=Folate biosynthesis}}
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* MetaNetX (MNX) Equation : MNXR97394
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{{#set: reaction found=10}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=41}}
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{{#set: common name=Dihydrodipicolinate synthase}}
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{{#set: completion rate=24.0}}
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{{#set: gene associated=B471_RS0118135|B471_RS20130}}
 +
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:37, 21 March 2018

Reaction DHDPS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Dihydrodipicolinate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Aspartate 4-semialdehyde[c] + 1.0 Pyruvate[c] => 1.0 H+[c] + 1.0 2,3-Dihydrodipicolinate[c] + 2.0 H2O H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR97394




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