Difference between revisions of "DXPS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/BTNt2i_CUT BTNt2i_CUT] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * Wit...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP3 PUNP3] == * direction: ** REVERSIBLE * common name: ** Purine-nucleoside phosphorylase (Guano...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/BTNt2i_CUT BTNt2i_CUT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP3 PUNP3] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** Purine-nucleoside phosphorylase (Guanosine)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[btn]][e] '''+''' 1.0 [[h]][e] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[btn]][c]
+
** 1.0 [[gsn]][c] '''+''' 1.0 [[pi]][c] '''<=>''' 1.0 [[gua]][c] '''+''' 1.0 [[r1p]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Biotin[e] '''+''' 1.0 H+[e] '''=>''' 1.0 H+[c] '''+''' 1.0 Biotin[c]
+
** 1.0 Guanosine[c] '''+''' 1.0 Phosphate[c] '''<=>''' 1.0 Guanine[c] '''+''' 1.0 Alpha-D-Ribose 1-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS20185]]
+
* [[B471_RS0100890]]
** MANUAL
+
** [[pantograph]]-[[cljungdahlii]]
 +
** [[pantograph]]-[[bsubtilis]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''64''' reactions found over '''298''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[reaction found from orthology but we fixed reversibility based on biological expertise]]
+
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
{{#set: gene associated=B471_RS20185}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13233 13233]
{{#set: in pathway=}}
+
* EC Number : 2.4.2.1
{{#set: reconstruction category=manual}}
+
* MetaNetX (MNX) Equation : MNXR103345
{{#set: reconstruction source=reaction found from orthology but we fixed reversibility based on biological expertise}}
+
* KEGG Reaction : R02147
 +
* BioCyc : META:RXN0-5199
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Purine-nucleoside phosphorylase (Guanosine)}}
 +
{{#set: gene associated=B471_RS0100890}}
 +
{{#set: in pathway=map01100|map00230}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 00:42, 21 March 2018

Reaction PUNP3

  • direction:
    • REVERSIBLE
  • common name:
    • Purine-nucleoside phosphorylase (Guanosine)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Guanosine[c] + 1.0 Phosphate[c] <=> 1.0 Guanine[c] + 1.0 Alpha-D-Ribose 1-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.4.2.1
  • MetaNetX (MNX) Equation : MNXR103345
  • KEGG Reaction : R02147
  • BioCyc : META:RXN0-5199