Difference between revisions of "EX rmn"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730] == * common_name: ** Thiamine metabolism * Synonym(s): == Reaction(s) found == ''...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/EX_rmn EX_rmn] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With identi...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/EX_rmn EX_rmn] ==
* common_name:
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* direction:
** Thiamine metabolism
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** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''8''' reactions found over '''24''' reactions in the full pathway
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* With identifiers:
* [[ADK1]]
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** 1.0 [[rmn]][e] '''=>'''
** 1 associated gene(s):
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* With common name(s):
*** [[B471_RS0119710]]
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** 1.0 L-Rhamnose[e] '''=>'''
** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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== Genes associated with this reaction  ==
*** [[orthology-bsubtilis]]
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== Pathways  ==
*** [[orthology-aferrooxidans]]
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== Reconstruction information  ==
* [[ADK2]]
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* Category: [[manual]]
** 1 associated gene(s):
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** Source: [[manual-missing_rxn_creator]]
*** [[B471_RS0119710]]
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*** Comment: [[reaction from orthology templates not found by pantograph]]
** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[DADK]]
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** 1 associated gene(s):
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*** [[B471_RS0119710]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[DXPS]]
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** 1 associated gene(s):
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*** [[B471_RS0101820]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[PMPK]]
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** 1 associated gene(s):
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*** [[B471_RS0108570]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[TMK]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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* [[TMPK]]
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** 1 associated gene(s):
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*** [[B471_RS0105400]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[TMPPP]]
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** 1 associated gene(s):
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*** [[B471_RS0108575]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/ADK1m ADK1m]
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* [http://bigg.ucsd.edu/universal/reactions/ATAMh ATAMh]
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* [http://bigg.ucsd.edu/universal/reactions/ATDAMh ATDAMh]
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* [http://bigg.ucsd.edu/universal/reactions/ATDAMm ATDAMm]
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* [http://bigg.ucsd.edu/universal/reactions/DXS DXS]
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* [http://bigg.ucsd.edu/universal/reactions/HETZK HETZK]
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* [http://bigg.ucsd.edu/universal/reactions/HMPK1 HMPK1]
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* [http://bigg.ucsd.edu/universal/reactions/TDP TDP]
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* [http://bigg.ucsd.edu/universal/reactions/TDPm TDPm]
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* [http://bigg.ucsd.edu/universal/reactions/THMP THMP]
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* [http://bigg.ucsd.edu/universal/reactions/THMPe THMPe]
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* [http://bigg.ucsd.edu/universal/reactions/THMTP THMTP]
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* [http://bigg.ucsd.edu/universal/reactions/TMDPK TMDPK]
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* [http://bigg.ucsd.edu/universal/reactions/TMDPPK TMDPPK]
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* [http://bigg.ucsd.edu/universal/reactions/TMN TMN]
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* [http://bigg.ucsd.edu/universal/reactions/TYRL TYRL]
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== External links  ==
 
== External links  ==
{{#set: common_name=Thiamine metabolism}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: reaction found=8}}
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{{#set: in pathway=}}
{{#set: total reaction=24}}
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{{#set: reconstruction category=manual}}
{{#set: completion rate=33.0}}
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{{#set: reconstruction source=manual-missing_rxn_creator}}
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{{#set: reconstruction comment=reaction from orthology templates not found by pantograph}}

Latest revision as of 16:37, 21 March 2018

Reaction EX_rmn

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 rmn[e] =>
  • With common name(s):
    • 1.0 L-Rhamnose[e] =>

Genes associated with this reaction

Pathways

Reconstruction information

External links