Difference between revisions of "Map00030"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/BPNT BPNT] == * direction: ** LEFT-TO-RIGHT * common name: ** 3',5'-bisphosphate nucleotidase * Syn...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030] == * common_name: ** Pentose phosphate pathway * Synonym(s): == Reaction(s) found...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/BPNT BPNT] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** Pentose phosphate pathway
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* common name:
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** 3',5'-bisphosphate nucleotidase
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''20''' reactions found over '''69''' reactions in the full pathway
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** 1.0 [[h2o]][c] '''+''' 1.0 [[pap]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[amp]][c]
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* [[DRPA]]
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* With common name(s):
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** 1 associated gene(s):
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** 1.0 H2O H2O[c] '''+''' 1.0 Adenosine 3',5'-bisphosphate[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 AMP C10H12N5O7P[c]
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*** [[B471_RS0113280]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-cljungdahlii]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-bsubtilis]]
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* [[B471_RS0101420]]
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* [[EDA]]
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** [[pantograph]]-[[aferrooxidans]]
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** 1 associated gene(s):
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== Pathways  ==
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*** [[B471_RS0117335]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** 1 reconstruction source(s) associated:
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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*** [[orthology-aferrooxidans]]
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* [[map00920]]: [http://www.genome.jp/dbget-bin/www_bget?map00920 map00920]
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* [[EDD]]
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** '''5''' reactions found over '''56''' reactions in the full pathway
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** 1 associated gene(s):
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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*** [[B471_RS0109235]]
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** '''101''' reactions found over '''715''' reactions in the full pathway
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** 1 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[orthology-aferrooxidans]]
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* Category: [[orthology]]
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* [[FBA]]
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** Source: [[orthology-aferrooxidans]]
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** 2 associated gene(s):
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*** Tool: [[pantograph]]
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*** [[B471_RS0118210]]
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*** [[B471_RS0101615]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[FBA2]]
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** 1 associated gene(s):
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*** [[B471_RS0101615]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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* [[FBA3]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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* [[FBP]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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* [[G6PDH2r]]
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** 1 associated gene(s):
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*** [[B471_RS0108275]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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* [[GND]]
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** 2 associated gene(s):
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*** [[B471_RS0108280]]
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*** [[B471_RS0107325]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[GNK]]
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** 1 associated gene(s):
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*** [[B471_RS0113565]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[PFK]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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* [[PGI]]
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** 1 associated gene(s):
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*** [[B471_RS0108285]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[PPM2]]
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** 1 associated gene(s):
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*** [[B471_RS22550]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[PRPPS]]
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** 1 associated gene(s):
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*** [[B471_RS0107450]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[RBK]]
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** 1 associated gene(s):
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*** [[B471_RS0117105]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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* [[RPE]]
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** 1 associated gene(s):
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*** [[B471_RS23765]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[RPI]]
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** 2 associated gene(s):
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*** [[B471_RS0116940]]
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*** [[B471_RS0116500]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[TALA]]
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** 3 associated gene(s):
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*** [[B471_RS0106410]]
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*** [[B471_RS0102315]]
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*** [[B471_RS0108285]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[TKT1]]
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** 1 associated gene(s):
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*** [[B471_RS0108290]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[TKT2]]
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** 1 associated gene(s):
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*** [[B471_RS0108290]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/2DGLCNRy 2DGLCNRy]
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* [http://bigg.ucsd.edu/universal/reactions/2DHGLCK 2DHGLCK]
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* [http://bigg.ucsd.edu/universal/reactions/BFBP BFBP]
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* [http://bigg.ucsd.edu/universal/reactions/BFBPh BFBPh]
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* [http://bigg.ucsd.edu/universal/reactions/DASCBH DASCBH]
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* [http://bigg.ucsd.edu/universal/reactions/DDGLK DDGLK]
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* [http://bigg.ucsd.edu/universal/reactions/DDPGALA DDPGALA]
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* [http://bigg.ucsd.edu/universal/reactions/DKGLCNR2y DKGLCNR2y]
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* [http://bigg.ucsd.edu/universal/reactions/DRBK DRBK]
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* [http://bigg.ucsd.edu/universal/reactions/FBA3hi FBA3hi]
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* [http://bigg.ucsd.edu/universal/reactions/FBAf FBAf]
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* [http://bigg.ucsd.edu/universal/reactions/FBAh FBAh]
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* [http://bigg.ucsd.edu/universal/reactions/FBAm FBAm]
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* [http://bigg.ucsd.edu/universal/reactions/FPGPL FPGPL]
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* [http://bigg.ucsd.edu/universal/reactions/G6PADH G6PADH]
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* [http://bigg.ucsd.edu/universal/reactions/G6PADHh G6PADHh]
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* [http://bigg.ucsd.edu/universal/reactions/G6PBDH G6PBDH]
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* [http://bigg.ucsd.edu/universal/reactions/G6PBDHh G6PBDHh]
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* [http://bigg.ucsd.edu/universal/reactions/G6PDH1 G6PDH1]
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* [http://bigg.ucsd.edu/universal/reactions/G6PDH1er G6PDH1er]
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* [http://bigg.ucsd.edu/universal/reactions/G6PDH2er G6PDH2er]
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* [http://bigg.ucsd.edu/universal/reactions/G6PI G6PI]
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* [http://bigg.ucsd.edu/universal/reactions/G6PI2 G6PI2]
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* [http://bigg.ucsd.edu/universal/reactions/G6PI3 G6PI3]
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* [http://bigg.ucsd.edu/universal/reactions/G6PI_1 G6PI_1]
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* [http://bigg.ucsd.edu/universal/reactions/G6PIh G6PIh]
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* [http://bigg.ucsd.edu/universal/reactions/GADktpp GADktpp]
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* [http://bigg.ucsd.edu/universal/reactions/GLYCK2 GLYCK2]
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* [http://bigg.ucsd.edu/universal/reactions/GNDer GNDer]
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* [http://bigg.ucsd.edu/universal/reactions/GNKh GNKh]
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* [http://bigg.ucsd.edu/universal/reactions/PFK_3 PFK_3]
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* [http://bigg.ucsd.edu/universal/reactions/PFK_adp PFK_adp]
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* [http://bigg.ucsd.edu/universal/reactions/PFK_ppi PFK_ppi]
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* [http://bigg.ucsd.edu/universal/reactions/PFKh PFKh]
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* [http://bigg.ucsd.edu/universal/reactions/PGDHh PGDHh]
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* [http://bigg.ucsd.edu/universal/reactions/PGIA PGIA]
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* [http://bigg.ucsd.edu/universal/reactions/PGIAh PGIAh]
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* [http://bigg.ucsd.edu/universal/reactions/PGIBh PGIBh]
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* [http://bigg.ucsd.edu/universal/reactions/PGL PGL]
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* [http://bigg.ucsd.edu/universal/reactions/PGLCNDH PGLCNDH]
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* [http://bigg.ucsd.edu/universal/reactions/PGLer PGLer]
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* [http://bigg.ucsd.edu/universal/reactions/PGLh PGLh]
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* [http://bigg.ucsd.edu/universal/reactions/R15BPK R15BPK]
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* [http://bigg.ucsd.edu/universal/reactions/RPDPK RPDPK]
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* [http://bigg.ucsd.edu/universal/reactions/RPEh RPEh]
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* [http://bigg.ucsd.edu/universal/reactions/RPIh RPIh]
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* [http://bigg.ucsd.edu/universal/reactions/TAh TAh]
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* [http://bigg.ucsd.edu/universal/reactions/TKT1h TKT1h]
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* [http://bigg.ucsd.edu/universal/reactions/TKT2h TKT2h]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common_name=Pentose phosphate pathway}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10040 10040]
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{{#set: reaction found=20}}
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* EC Number : 3.1.3.7
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{{#set: total reaction=69}}
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* MetaNetX (MNX) Equation : MNXR96321
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{{#set: completion rate=29.0}}
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* KEGG Reaction : R00188
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* BioCyc : META:325-BISPHOSPHATE-NUCLEOTIDASE-RXN
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=3',5'-bisphosphate nucleotidase}}
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{{#set: gene associated=B471_RS0101420}}
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{{#set: in pathway=map01100|map00920|map01120}}
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{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction source=orthology-aferrooxidans}}
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−
{{#set: reconstruction tool=pantograph}}
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Latest revision as of 16:15, 21 March 2018

Pathway map00030

  • common_name:
    • Pentose phosphate pathway
  • Synonym(s):

Reaction(s) found

20 reactions found over 69 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=Map00030&oldid=6482"