Difference between revisions of "Map00281"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OIVD2 OIVD2] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-oxoisovalerate dehydrogenase (acy...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00281 map00281] == * common_name: ** Geraniol degradation * Synonym(s): == Reaction(s) found == '...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/OIVD2 OIVD2] ==
+
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00281 map00281] ==
−
* direction:
+
* common_name:
−
** LEFT-TO-RIGHT
+
** Geraniol degradation
−
* common name:
+
−
** 2-oxoisovalerate dehydrogenase (acylating; 3-methyl-2-oxobutanoate)
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''3''' reactions found over '''56''' reactions in the full pathway
−
** 1.0 [[coa]][c] '''+''' 1.0 [[nad]][c] '''+''' 1.0 [[3mob]][c] '''=>''' 1.0 [[nadh]][c] '''+''' 1.0 [[co2]][c] '''+''' 1.0 [[ibcoa]][c]
+
* [[ECOAH9ir]]
−
* With common name(s):
+
** 2 associated gene(s):
−
** 1.0 Coenzyme A[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 3-Methyl-2-oxobutanoate[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 CO2 CO2[c] '''+''' 1.0 Isobutyryl-CoA[c]
+
*** [[B471_RS0115580]]
−
 
+
*** [[B471_RS0110785]]
−
== Genes associated with this reaction  ==
+
** 1 reconstruction source(s) associated:
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-bsubtilis]]
−
* [[B471_RS0110915]]
+
* [[HACD1]]
−
** [[pantograph]]-[[bsubtilis]]
+
** 0 associated gene:
−
* [[B471_RS0110910]]
+
** 1 reconstruction source(s) associated:
−
** [[pantograph]]-[[bsubtilis]]
+
*** [[manual-reaction_to_add_delete]]
−
* [[B471_RS0110905]]
+
* [[HMGL]]
−
** [[pantograph]]-[[bsubtilis]]
+
** 1 associated gene(s):
−
* [[B471_RS0110920]]
+
*** [[B471_RS0108405]]
−
** [[pantograph]]-[[bsubtilis]]
+
** 1 reconstruction source(s) associated:
−
* [[B471_RS0110900]]
+
*** [[orthology-bsubtilis]]
−
** [[pantograph]]-[[bsubtilis]]
+
== Reaction(s) not found ==
−
== Pathways  ==
+
* [http://bigg.ucsd.edu/universal/reactions/3HOPCD 3HOPCD]
−
== Reconstruction information  ==
+
* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLm C2M26DCOAHLm]
−
* Category: [[orthology]]
+
* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLx C2M26DCOAHLx]
−
** Source: [[orthology-bsubtilis]]
+
* [http://bigg.ucsd.edu/universal/reactions/DHACOAH DHACOAH]
−
*** Tool: [[pantograph]]
+
* [http://bigg.ucsd.edu/universal/reactions/ECH_3hivcoa ECH_3hivcoa]
 +
* [http://bigg.ucsd.edu/universal/reactions/ECOAH11p ECOAH11p]
 +
* [http://bigg.ucsd.edu/universal/reactions/ECOAH12 ECOAH12]
 +
* [http://bigg.ucsd.edu/universal/reactions/ECOAH12m ECOAH12m]
 +
* [http://bigg.ucsd.edu/universal/reactions/ECOAH9m ECOAH9m]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD10p HACD10p]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD1_1 HACD1_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD1i HACD1i]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD1m HACD1m]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD1x HACD1x]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD2 HACD2]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD2_1 HACD2_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD2i HACD2i]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD2m HACD2m]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD3 HACD3]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD3_1 HACD3_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD3i HACD3i]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD3m HACD3m]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD4 HACD4]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD4i HACD4i]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD4m HACD4m]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD4p HACD4p]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD5 HACD5]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD5i HACD5i]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD5m HACD5m]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD5p HACD5p]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD6 HACD6]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD6i HACD6i]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD6m HACD6m]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD6p HACD6p]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD7 HACD7]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD7i HACD7i]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD7m HACD7m]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD7p HACD7p]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD9 HACD9]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACD9m HACD9m]
 +
* [http://bigg.ucsd.edu/universal/reactions/HACDp HACDp]
 +
* [http://bigg.ucsd.edu/universal/reactions/HADPCOADH3 HADPCOADH3]
 +
* [http://bigg.ucsd.edu/universal/reactions/HBCO_nadp HBCO_nadp]
 +
* [http://bigg.ucsd.edu/universal/reactions/HBCO_nadp_m HBCO_nadp_m]
 +
* [http://bigg.ucsd.edu/universal/reactions/HIBDkt HIBDkt]
 +
* [http://bigg.ucsd.edu/universal/reactions/HMGL_1 HMGL_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/HMGLm HMGLm]
 +
* [http://bigg.ucsd.edu/universal/reactions/HMGLx HMGLx]
 +
* [http://bigg.ucsd.edu/universal/reactions/HMNO HMNO]
 +
* [http://bigg.ucsd.edu/universal/reactions/KATp KATp]
 +
* [http://bigg.ucsd.edu/universal/reactions/OGCOAAT OGCOAAT]
 +
* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLm T2M26DCOAHLm]
 +
* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLx T2M26DCOAHLx]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common_name=Geraniol degradation}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13997 13997]
+
{{#set: reaction found=3}}
−
* EC Number : 1.2.1.25
+
{{#set: total reaction=56}}
−
* MetaNetX (MNX) Equation : MNXR102173
+
{{#set: completion rate=5.0}}
−
* KEGG Reaction : R01210
+
−
* BioCyc : META:1.2.1.25-RXN
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=2-oxoisovalerate dehydrogenase (acylating; 3-methyl-2-oxobutanoate)}}
+
−
{{#set: gene associated=B471_RS0110915|B471_RS0110910|B471_RS0110905|B471_RS0110920|B471_RS0110900}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-bsubtilis}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 16:14, 21 March 2018

Pathway map00281

  • common_name:
    • Geraniol degradation
  • Synonym(s):

Reaction(s) found

3 reactions found over 56 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=Map00281&oldid=6402"