Difference between revisions of "Map00330"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/METSR_S1 METSR_S1] == * direction: ** LEFT-TO-RIGHT * common name: ** L methionine S oxide reductas...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330] == * common_name: ** Arginine and proline metabolism * Synonym(s): == Reaction(s)...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/METSR_S1 METSR_S1] ==
+
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330] ==
−
* direction:
+
* common_name:
−
** LEFT-TO-RIGHT
+
** Arginine and proline metabolism
−
* common name:
+
−
** L methionine S oxide reductase  trdrd
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''19''' reactions found over '''149''' reactions in the full pathway
−
** 1.0 [[metox]][c] '''+''' 1.0 [[trdrd]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[trdox]][c] '''+''' 1.0 [[met__L]][c]
+
* [[ABUTD]]
−
* With common name(s):
+
** 2 associated gene(s):
−
** 1.0 L Methionine S oxide C5H11NO3S[c] '''+''' 1.0 Reduced thioredoxin[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 Oxidized thioredoxin[c] '''+''' 1.0 L-Methionine[c]
+
*** [[B471_RS0119455]]
−
 
+
*** [[B471_RS0115620]]
−
== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
−
Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-bsubtilis]]
−
* [[B471_RS0105880]]
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* [[ADMDC]]
−
** [[pantograph]]-[[bsubtilis]]
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** 1 associated gene(s):
−
== Pathways  ==
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*** [[B471_RS0100905]]
−
== Reconstruction information  ==
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** 3 reconstruction source(s) associated:
−
* Category: [[orthology]]
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*** [[orthology-cljungdahlii]]
−
** Source: [[orthology-bsubtilis]]
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*** [[orthology-bsubtilis]]
−
*** Tool: [[pantograph]]
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*** [[orthology-aferrooxidans]]
 +
* [[AGMT]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0113670]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
* [[ARGDC]]
 +
** 2 associated gene(s):
 +
*** [[B471_RS21410]]
 +
*** [[B471_RS21240]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[ARGN]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0119575]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
* [[ASPTA]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0109180]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[CSND]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0110635]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
* [[DALAOX]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0117705]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
* [[G5SADs]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-reaction_to_add_delete]]
 +
* [[G5SD]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0101260]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[GLU5K]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0101265]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[MCSNAH]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0110870]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
* [[ORNDC]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS21410]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
* [[P5CD]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0100095]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
* [[P5CR]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS21630]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[PRO1x]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0119645]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
* [[PTRCTA]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0110025]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
* [[SPMS]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0113665]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
* [[SPRMS]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0113665]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
== Reaction(s) not found ==
 +
* [http://bigg.ucsd.edu/universal/reactions/3HXKYNOXDA 3HXKYNOXDA]
 +
* [http://bigg.ucsd.edu/universal/reactions/3MOXTYROX 3MOXTYROX]
 +
* [http://bigg.ucsd.edu/universal/reactions/3SALATAi 3SALATAi]
 +
* [http://bigg.ucsd.edu/universal/reactions/3SALATAim 3SALATAim]
 +
* [http://bigg.ucsd.edu/universal/reactions/41R1H2MAE12BOOX 41R1H2MAE12BOOX]
 +
* [http://bigg.ucsd.edu/universal/reactions/41R2A1H12BOOX 41R2A1H12BOOX]
 +
* [http://bigg.ucsd.edu/universal/reactions/4ABUTD 4ABUTD]
 +
* [http://bigg.ucsd.edu/universal/reactions/4HGLSD 4HGLSD]
 +
* [http://bigg.ucsd.edu/universal/reactions/4HGLSDm 4HGLSDm]
 +
* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOX 5HOXINDACTOX]
 +
* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOXm 5HOXINDACTOXm]
 +
* [http://bigg.ucsd.edu/universal/reactions/5HOXINOXDA 5HOXINOXDA]
 +
* [http://bigg.ucsd.edu/universal/reactions/5HXKYNOXDA 5HXKYNOXDA]
 +
* [http://bigg.ucsd.edu/universal/reactions/AABHH AABHH]
 +
* [http://bigg.ucsd.edu/universal/reactions/AABTN AABTN]
 +
* [http://bigg.ucsd.edu/universal/reactions/AATC AATC]
 +
* [http://bigg.ucsd.edu/universal/reactions/AATG AATG]
 +
* [http://bigg.ucsd.edu/universal/reactions/AATGm AATGm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ABOR ABOR]
 +
* [http://bigg.ucsd.edu/universal/reactions/ABUTDm ABUTDm]
 +
* [http://bigg.ucsd.edu/universal/reactions/AGDI AGDI]
 +
* [http://bigg.ucsd.edu/universal/reactions/AGDIn AGDIn]
 +
* [http://bigg.ucsd.edu/universal/reactions/AGMDA AGMDA]
 +
* [http://bigg.ucsd.edu/universal/reactions/AGMTm AGMTm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALATA_D ALATA_D]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD20x ALDD20x]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD20xm ALDD20xm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDH ALDH]
 +
* [http://bigg.ucsd.edu/universal/reactions/AMID AMID]
 +
* [http://bigg.ucsd.edu/universal/reactions/AMID2 AMID2]
 +
* [http://bigg.ucsd.edu/universal/reactions/AMID3 AMID3]
 +
* [http://bigg.ucsd.edu/universal/reactions/AMID4 AMID4]
 +
* [http://bigg.ucsd.edu/universal/reactions/AMID5 AMID5]
 +
* [http://bigg.ucsd.edu/universal/reactions/AMID_1 AMID_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/AMPTASECG AMPTASECG]
 +
* [http://bigg.ucsd.edu/universal/reactions/AMPTASECGe AMPTASECGe]
 +
* [http://bigg.ucsd.edu/universal/reactions/APAPTm APAPTm]
 +
* [http://bigg.ucsd.edu/universal/reactions/APCS APCS]
 +
* [http://bigg.ucsd.edu/universal/reactions/APRTO2 APRTO2]
 +
* [http://bigg.ucsd.edu/universal/reactions/ARGDCm ARGDCm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ARGDCpp ARGDCpp]
 +
* [http://bigg.ucsd.edu/universal/reactions/ARGNm ARGNm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ARUH ARUH]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASAPT ASAPT]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPATh ASPATh]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPTAm ASPTAm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPTAp ASPTAp]
 +
* [http://bigg.ucsd.edu/universal/reactions/AST AST]
 +
* [http://bigg.ucsd.edu/universal/reactions/CK CK]
 +
* [http://bigg.ucsd.edu/universal/reactions/CKc CKc]
 +
* [http://bigg.ucsd.edu/universal/reactions/CMPA CMPA]
 +
* [http://bigg.ucsd.edu/universal/reactions/CRTNh CRTNh]
 +
* [http://bigg.ucsd.edu/universal/reactions/CRTNsyn CRTNsyn]
 +
* [http://bigg.ucsd.edu/universal/reactions/CSPMDDC CSPMDDC]
 +
* [http://bigg.ucsd.edu/universal/reactions/CSPMDDH CSPMDDH]
 +
* [http://bigg.ucsd.edu/universal/reactions/DALAOXx DALAOXx]
 +
* [http://bigg.ucsd.edu/universal/reactions/DARGOp DARGOp]
 +
* [http://bigg.ucsd.edu/universal/reactions/DDMCITALOR DDMCITALOR]
 +
* [http://bigg.ucsd.edu/universal/reactions/DIAT DIAT]
 +
* [http://bigg.ucsd.edu/universal/reactions/DMCITALOR DMCITALOR]
 +
* [http://bigg.ucsd.edu/universal/reactions/DORNOp DORNOp]
 +
* [http://bigg.ucsd.edu/universal/reactions/DPROOp DPROOp]
 +
* [http://bigg.ucsd.edu/universal/reactions/EHGLAT EHGLAT]
 +
* [http://bigg.ucsd.edu/universal/reactions/EHGLATm EHGLATm]
 +
* [http://bigg.ucsd.edu/universal/reactions/EHGLATp EHGLATp]
 +
* [http://bigg.ucsd.edu/universal/reactions/G5DHx G5DHx]
 +
* [http://bigg.ucsd.edu/universal/reactions/G5SADrm G5SADrm]
 +
* [http://bigg.ucsd.edu/universal/reactions/G5SD2 G5SD2]
 +
* [http://bigg.ucsd.edu/universal/reactions/G5SDym G5SDym]
 +
* [http://bigg.ucsd.edu/universal/reactions/GACMTRc GACMTRc]
 +
* [http://bigg.ucsd.edu/universal/reactions/GDBTALDH GDBTALDH]
 +
* [http://bigg.ucsd.edu/universal/reactions/GGGABADr GGGABADr]
 +
* [http://bigg.ucsd.edu/universal/reactions/GGGABAH GGGABAH]
 +
* [http://bigg.ucsd.edu/universal/reactions/GGPTRCS GGPTRCS]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLACO GLACO]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLACOm GLACOm]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLU5Km GLU5Km]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLYALDDr GLYALDDr]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLYAMDTRc GLYAMDTRc]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLYOp GLYOp]
 +
* [http://bigg.ucsd.edu/universal/reactions/GUDBUTNAH GUDBUTNAH]
 +
* [http://bigg.ucsd.edu/universal/reactions/HPROa HPROa]
 +
* [http://bigg.ucsd.edu/universal/reactions/HPROb HPROb]
 +
* [http://bigg.ucsd.edu/universal/reactions/HPROx HPROx]
 +
* [http://bigg.ucsd.edu/universal/reactions/HPROxm HPROxm]
 +
* [http://bigg.ucsd.edu/universal/reactions/HPROym HPROym]
 +
* [http://bigg.ucsd.edu/universal/reactions/IMACTD IMACTD]
 +
* [http://bigg.ucsd.edu/universal/reactions/IMACTD_m IMACTD_m]
 +
* [http://bigg.ucsd.edu/universal/reactions/LALGP LALGP]
 +
* [http://bigg.ucsd.edu/universal/reactions/LCYSTAT LCYSTAT]
 +
* [http://bigg.ucsd.edu/universal/reactions/LCYSTATm LCYSTATm]
 +
* [http://bigg.ucsd.edu/universal/reactions/MAOLNOR MAOLNOR]
 +
* [http://bigg.ucsd.edu/universal/reactions/NABTNO NABTNO]
 +
* [http://bigg.ucsd.edu/universal/reactions/NABTNOm NABTNOm]
 +
* [http://bigg.ucsd.edu/universal/reactions/NOPD NOPD]
 +
* [http://bigg.ucsd.edu/universal/reactions/NOS NOS]
 +
* [http://bigg.ucsd.edu/universal/reactions/NOS1 NOS1]
 +
* [http://bigg.ucsd.edu/universal/reactions/NOS2 NOS2]
 +
* [http://bigg.ucsd.edu/universal/reactions/NOS2_1 NOS2_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/OARGDC OARGDC]
 +
* [http://bigg.ucsd.edu/universal/reactions/ORDCh ORDCh]
 +
* [http://bigg.ucsd.edu/universal/reactions/ORNCD ORNCD]
 +
* [http://bigg.ucsd.edu/universal/reactions/ORNTA ORNTA]
 +
* [http://bigg.ucsd.edu/universal/reactions/ORNTArm ORNTArm]
 +
* [http://bigg.ucsd.edu/universal/reactions/P5CDm P5CDm]
 +
* [http://bigg.ucsd.edu/universal/reactions/P5CRm P5CRm]
 +
* [http://bigg.ucsd.edu/universal/reactions/P5CRx P5CRx]
 +
* [http://bigg.ucsd.edu/universal/reactions/P5CRxm P5CRxm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PHCD PHCD]
 +
* [http://bigg.ucsd.edu/universal/reactions/PHCDm PHCDm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PHCHGS PHCHGS]
 +
* [http://bigg.ucsd.edu/universal/reactions/PHCHGSm PHCHGSm]
 +
* [http://bigg.ucsd.edu/universal/reactions/POLYAO2 POLYAO2]
 +
* [http://bigg.ucsd.edu/universal/reactions/POLYAO3 POLYAO3]
 +
* [http://bigg.ucsd.edu/universal/reactions/PRO1xm PRO1xm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PRO1y PRO1y]
 +
* [http://bigg.ucsd.edu/universal/reactions/PROAKGOX1 PROAKGOX1]
 +
* [http://bigg.ucsd.edu/universal/reactions/PROAKGOX1r PROAKGOX1r]
 +
* [http://bigg.ucsd.edu/universal/reactions/PROD2 PROD2]
 +
* [http://bigg.ucsd.edu/universal/reactions/PROD2m PROD2m]
 +
* [http://bigg.ucsd.edu/universal/reactions/PTRCAT1 PTRCAT1]
 +
* [http://bigg.ucsd.edu/universal/reactions/PUTA3 PUTA3]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYLALDOX PYLALDOX]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYLALDOXm PYLALDOXm]
 +
* [http://bigg.ucsd.edu/universal/reactions/SADH SADH]
 +
* [http://bigg.ucsd.edu/universal/reactions/SGDS SGDS]
 +
* [http://bigg.ucsd.edu/universal/reactions/SGSAD SGSAD]
 +
* [http://bigg.ucsd.edu/universal/reactions/SOTA SOTA]
 +
* [http://bigg.ucsd.edu/universal/reactions/SPMDAT1 SPMDAT1]
 +
* [http://bigg.ucsd.edu/universal/reactions/SPMDAT2 SPMDAT2]
 
== External links  ==
 
== External links  ==
−
* EC Number : 1.8.4.11
+
{{#set: common_name=Arginine and proline metabolism}}
−
* MetaNetX (MNX) Equation : MNXR101484
+
{{#set: reaction found=19}}
−
* KEGG Reaction : R02025
+
{{#set: total reaction=149}}
−
* BioCyc : META:1.8.4.13-RXN
+
{{#set: completion rate=13.0}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=L methionine S oxide reductase  trdrd }}
+
−
{{#set: gene associated=B471_RS0105880}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-bsubtilis}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 16:14, 21 March 2018

Pathway map00330

  • common_name:
    • Arginine and proline metabolism
  • Synonym(s):

Reaction(s) found

19 reactions found over 149 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=Map00330&oldid=6412"