Difference between revisions of "Map00561"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ADSL1r_CUT ADSL1r_CUT] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * Wit...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00561 map00561] == * common_name: ** Glycerolipid metabolism * Synonym(s): == Reaction(s) found ==...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ADSL1r_CUT ADSL1r_CUT] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00561 map00561] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** Glycerolipid metabolism
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''9''' reactions found over '''83''' reactions in the full pathway
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** 1.0 [[dcamp]][c] '''=>''' 1.0 [[amp]][c] '''+''' 1.0 [[fum]][c]
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* [[ABUTD]]
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* With common name(s):
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** 2 associated gene(s):
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** 1.0 N6-(1,2-Dicarboxyethyl)-AMP[c] '''=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 Fumarate[c]
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*** [[B471_RS0119455]]
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*** [[B471_RS0115620]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-bsubtilis]]
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* [[B471_RS0105285]]
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* [[AGPAT120]]
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** missing_rxn_creator
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** 1 associated gene(s):
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== Pathways  ==
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*** [[B471_RS0101020]]
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== Reconstruction information  ==
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** 1 reconstruction source(s) associated:
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* Category: [[manual]]
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*** [[orthology-cljungdahlii]]
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** Source: [[manual-missing_rxn_creator]]
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* [[AGPAT140]]
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*** Comment: [[reaction found from orthology but we fixed reversibility based on biological expertise]]
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** 1 associated gene(s):
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*** [[B471_RS0101020]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[AGPAT160]]
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** 1 associated gene(s):
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*** [[B471_RS0101020]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[AGPAT161]]
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** 1 associated gene(s):
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*** [[B471_RS0101020]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[AGPAT180]]
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** 1 associated gene(s):
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*** [[B471_RS0101020]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[AGPAT181]]
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** 1 associated gene(s):
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*** [[B471_RS0101020]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[GLYCK]]
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** 1 associated gene(s):
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*** [[B471_RS21900]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[GLYK]]
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** 1 associated gene(s):
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*** [[B471_RS0113565]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/13PPDH 13PPDH]
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* [http://bigg.ucsd.edu/universal/reactions/4ABUTD 4ABUTD]
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* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOX 5HOXINDACTOX]
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* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOXm 5HOXINDACTOXm]
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* [http://bigg.ucsd.edu/universal/reactions/ABOR ABOR]
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* [http://bigg.ucsd.edu/universal/reactions/ABUTDm ABUTDm]
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* [http://bigg.ucsd.edu/universal/reactions/AGPAT141 AGPAT141]
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* [http://bigg.ucsd.edu/universal/reactions/AGPAT160h AGPAT160h]
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* [http://bigg.ucsd.edu/universal/reactions/ALCD19 ALCD19]
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* [http://bigg.ucsd.edu/universal/reactions/ALCD19y ALCD19y]
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* [http://bigg.ucsd.edu/universal/reactions/ALCD22_L ALCD22_L]
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* [http://bigg.ucsd.edu/universal/reactions/ALCD3ir ALCD3ir]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD20x ALDD20x]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD20xm ALDD20xm]
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* [http://bigg.ucsd.edu/universal/reactions/ALDH ALDH]
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* [http://bigg.ucsd.edu/universal/reactions/ARABR ARABR]
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* [http://bigg.ucsd.edu/universal/reactions/DAGK160 DAGK160]
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* [http://bigg.ucsd.edu/universal/reactions/DAGK160h DAGK160h]
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* [http://bigg.ucsd.edu/universal/reactions/DHAK DHAK]
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* [http://bigg.ucsd.edu/universal/reactions/EMGH EMGH]
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* [http://bigg.ucsd.edu/universal/reactions/EPMGH EPMGH]
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* [http://bigg.ucsd.edu/universal/reactions/G3PAT120 G3PAT120]
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* [http://bigg.ucsd.edu/universal/reactions/G3PAT140 G3PAT140]
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* [http://bigg.ucsd.edu/universal/reactions/G3PAT141 G3PAT141]
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* [http://bigg.ucsd.edu/universal/reactions/G3PAT160 G3PAT160]
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* [http://bigg.ucsd.edu/universal/reactions/G3PAT160_1 G3PAT160_1]
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* [http://bigg.ucsd.edu/universal/reactions/G3PAT160h G3PAT160h]
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* [http://bigg.ucsd.edu/universal/reactions/G3PAT161 G3PAT161]
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* [http://bigg.ucsd.edu/universal/reactions/G3PAT180 G3PAT180]
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* [http://bigg.ucsd.edu/universal/reactions/G3PAT180h G3PAT180h]
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* [http://bigg.ucsd.edu/universal/reactions/G3PAT181 G3PAT181]
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* [http://bigg.ucsd.edu/universal/reactions/G3PAT181h G3PAT181h]
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* [http://bigg.ucsd.edu/universal/reactions/G3PT G3PT]
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* [http://bigg.ucsd.edu/universal/reactions/GALIGH GALIGH]
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* [http://bigg.ucsd.edu/universal/reactions/GALOR GALOR]
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* [http://bigg.ucsd.edu/universal/reactions/GALS3 GALS3]
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* [http://bigg.ucsd.edu/universal/reactions/GGGH GGGH]
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* [http://bigg.ucsd.edu/universal/reactions/GGLGH GGLGH]
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* [http://bigg.ucsd.edu/universal/reactions/GLACO GLACO]
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* [http://bigg.ucsd.edu/universal/reactions/GLACOm GLACOm]
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* [http://bigg.ucsd.edu/universal/reactions/GLYALDDr GLYALDDr]
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* [http://bigg.ucsd.edu/universal/reactions/GLYCDH GLYCDH]
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* [http://bigg.ucsd.edu/universal/reactions/GLYCDx GLYCDx]
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* [http://bigg.ucsd.edu/universal/reactions/GLYCDy GLYCDy]
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* [http://bigg.ucsd.edu/universal/reactions/GLYCK2 GLYCK2]
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* [http://bigg.ucsd.edu/universal/reactions/GLYKm GLYKm]
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* [http://bigg.ucsd.edu/universal/reactions/GLYPT GLYPT]
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* [http://bigg.ucsd.edu/universal/reactions/GULND GULND]
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* [http://bigg.ucsd.edu/universal/reactions/GULNDer GULNDer]
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* [http://bigg.ucsd.edu/universal/reactions/IMACTD IMACTD]
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* [http://bigg.ucsd.edu/universal/reactions/IMACTD_m IMACTD_m]
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* [http://bigg.ucsd.edu/universal/reactions/MELTGH MELTGH]
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* [http://bigg.ucsd.edu/universal/reactions/MGHB MGHB]
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* [http://bigg.ucsd.edu/universal/reactions/MLGH MLGH]
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* [http://bigg.ucsd.edu/universal/reactions/MTGH MTGH]
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* [http://bigg.ucsd.edu/universal/reactions/NABTNO NABTNO]
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* [http://bigg.ucsd.edu/universal/reactions/NABTNOm NABTNOm]
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* [http://bigg.ucsd.edu/universal/reactions/OAGMIG OAGMIG]
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* [http://bigg.ucsd.edu/universal/reactions/PAPA160 PAPA160]
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* [http://bigg.ucsd.edu/universal/reactions/PAPA160h PAPA160h]
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* [http://bigg.ucsd.edu/universal/reactions/PAPA160pp PAPA160pp]
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* [http://bigg.ucsd.edu/universal/reactions/PYLALDOX PYLALDOX]
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* [http://bigg.ucsd.edu/universal/reactions/PYLALDOXm PYLALDOXm]
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* [http://bigg.ucsd.edu/universal/reactions/RAFGH RAFGH]
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* [http://bigg.ucsd.edu/universal/reactions/RGH RGH]
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* [http://bigg.ucsd.edu/universal/reactions/SBPP1 SBPP1]
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* [http://bigg.ucsd.edu/universal/reactions/SBPP1er SBPP1er]
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* [http://bigg.ucsd.edu/universal/reactions/SBPP3 SBPP3]
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* [http://bigg.ucsd.edu/universal/reactions/SBPP3er SBPP3er]
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* [http://bigg.ucsd.edu/universal/reactions/SBTRh SBTRh]
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* [http://bigg.ucsd.edu/universal/reactions/SQD1 SQD1]
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* [http://bigg.ucsd.edu/universal/reactions/STACHGALACT STACHGALACT]
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* [http://bigg.ucsd.edu/universal/reactions/SYGH SYGH]
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* [http://bigg.ucsd.edu/universal/reactions/UDPSQS UDPSQS]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common_name=Glycerolipid metabolism}}
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{{#set: gene associated=B471_RS0105285}}
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{{#set: reaction found=9}}
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{{#set: in pathway=}}
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{{#set: total reaction=83}}
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{{#set: reconstruction category=manual}}
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{{#set: completion rate=11.0}}
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{{#set: reconstruction source=manual-missing_rxn_creator}}
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{{#set: reconstruction comment=reaction found from orthology but we fixed reversibility based on biological expertise}}
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Latest revision as of 16:15, 21 March 2018

Pathway map00561

  • common_name:
    • Glycerolipid metabolism
  • Synonym(s):

Reaction(s) found

9 reactions found over 83 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=Map00561&oldid=6461"