Difference between revisions of "Map00710"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DASYN180 DASYN180] == * direction: ** LEFT-TO-RIGHT * common name: ** CDP-diacylglycerol synthetase...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710] == * common_name: ** Carbon fixation in photosynthetic organisms * Synonym(s): ==...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/DASYN180 DASYN180] ==
+
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710] ==
−
* direction:
+
* common_name:
−
** LEFT-TO-RIGHT
+
** Carbon fixation in photosynthetic organisms
−
* common name:
+
−
** CDP-diacylglycerol synthetase (n-C18:0)
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''18''' reactions found over '''71''' reactions in the full pathway
−
** 1.0 [[h]][c] '''+''' 1.0 [[ctp]][c] '''+''' 1.0 [[pa180]][c] '''=>''' 1.0 [[cdpdodecg]][c] '''+''' 1.0 [[ppi]][c]
+
* [[ASPTA]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1.0 H+[c] '''+''' 1.0 CTP C9H12N3O14P3[c] '''+''' 1.0 1,2-dioctadecanoyl-sn-glycerol 3-phosphate[c] '''=>''' 1.0 CDP-1,2-dioctadecanoylglycerol[c] '''+''' 1.0 Diphosphate[c]
+
*** [[B471_RS0109180]]
−
 
+
** 3 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[orthology-cljungdahlii]]
−
== Pathways  ==
+
*** [[orthology-bsubtilis]]
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
*** [[orthology-aferrooxidans]]
−
** '''471''' reactions found over '''2349''' reactions in the full pathway
+
* [[FBA]]
−
* [[map00564]]: [http://www.genome.jp/dbget-bin/www_bget?map00564 map00564]
+
** 2 associated gene(s):
−
** '''36''' reactions found over '''134''' reactions in the full pathway
+
*** [[B471_RS0118210]]
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
*** [[B471_RS0101615]]
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
+
** 3 reconstruction source(s) associated:
−
* [[map04070]]: [http://www.genome.jp/dbget-bin/www_bget?map04070 map04070]
+
*** [[orthology-cljungdahlii]]
−
** '''8''' reactions found over '''21''' reactions in the full pathway
+
*** [[orthology-bsubtilis]]
−
== Reconstruction information  ==
+
*** [[orthology-aferrooxidans]]
−
* Category: [[manual]]
+
* [[FBA2]]
−
** Source: [[manual-reaction_to_add_delete]]
+
** 1 associated gene(s):
−
*** Comment: [[reaction added from literature evidence or biological expertise]]
+
*** [[B471_RS0101615]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
* [[FBA3]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-reaction_to_add_delete]]
 +
* [[FBP]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-reaction_to_add_delete]]
 +
* [[GAPD]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0119330]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
* [[GAPDi_nadp]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0119330]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-aferrooxidans]]
 +
* [[MDH]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0108660]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[ME1]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0101695]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
* [[ME2]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0108665]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
* [[PGK]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0119325]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[PPDK]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0118720]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
* [[PRUK]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS23885]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-aferrooxidans]]
 +
* [[RPE]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS23765]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[RPI]]
 +
** 2 associated gene(s):
 +
*** [[B471_RS0116940]]
 +
*** [[B471_RS0116500]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[TKT1]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0108290]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[TKT2]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0108290]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[TPI]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0119320]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
== Reaction(s) not found ==
 +
* [http://bigg.ucsd.edu/universal/reactions/3SALATAi 3SALATAi]
 +
* [http://bigg.ucsd.edu/universal/reactions/3SALATAim 3SALATAim]
 +
* [http://bigg.ucsd.edu/universal/reactions/AATC AATC]
 +
* [http://bigg.ucsd.edu/universal/reactions/AATG AATG]
 +
* [http://bigg.ucsd.edu/universal/reactions/AATGm AATGm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALATA_L ALATA_L]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALATA_Lm ALATA_Lm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPATh ASPATh]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPTAm ASPTAm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPTAp ASPTAp]
 +
* [http://bigg.ucsd.edu/universal/reactions/BFBP BFBP]
 +
* [http://bigg.ucsd.edu/universal/reactions/BFBPh BFBPh]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBA3hi FBA3hi]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBAf FBAf]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBAh FBAh]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBAm FBAm]
 +
* [http://bigg.ucsd.edu/universal/reactions/FPGPL FPGPL]
 +
* [http://bigg.ucsd.edu/universal/reactions/GAPDH_nadp_hi GAPDH_nadp_hi]
 +
* [http://bigg.ucsd.edu/universal/reactions/GAPDHf GAPDHf]
 +
* [http://bigg.ucsd.edu/universal/reactions/GAPDHh GAPDHh]
 +
* [http://bigg.ucsd.edu/universal/reactions/GAPDHm GAPDHm]
 +
* [http://bigg.ucsd.edu/universal/reactions/LCYSTAT LCYSTAT]
 +
* [http://bigg.ucsd.edu/universal/reactions/LCYSTATm LCYSTATm]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHC_nadp_hr MDHC_nadp_hr]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDH_nadp_fi MDH_nadp_fi]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDH_nadp_hi MDH_nadp_hi]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHf MDHf]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHh MDHh]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHi2 MDHi2]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHm MDHm]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHp MDHp]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHy MDHy]
 +
* [http://bigg.ucsd.edu/universal/reactions/ME1m ME1m]
 +
* [http://bigg.ucsd.edu/universal/reactions/ME2m ME2m]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGKf PGKf]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGKh PGKh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGKm PGKm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPC PPC]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPCK PPCK]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPCKm PPCKm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPDKh PPDKh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PRUK_1 PRUK_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/RBCh RBCh]
 +
* [http://bigg.ucsd.edu/universal/reactions/RBCh_1 RBCh_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/RBPC RBPC]
 +
* [http://bigg.ucsd.edu/universal/reactions/RBPCh RBPCh]
 +
* [http://bigg.ucsd.edu/universal/reactions/RPEh RPEh]
 +
* [http://bigg.ucsd.edu/universal/reactions/RPIh RPIh]
 +
* [http://bigg.ucsd.edu/universal/reactions/SBP SBP]
 +
* [http://bigg.ucsd.edu/universal/reactions/SBP_1 SBP_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/TKT1h TKT1h]
 +
* [http://bigg.ucsd.edu/universal/reactions/TKT2h TKT2h]
 +
* [http://bigg.ucsd.edu/universal/reactions/TPIh TPIh]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR97160
+
{{#set: common_name=Carbon fixation in photosynthetic organisms}}
−
* EC Number : 2.7.7.41
+
{{#set: reaction found=18}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: total reaction=71}}
−
{{#set: common name=CDP-diacylglycerol synthetase (n-C18:0)}}
+
{{#set: completion rate=25.0}}
−
{{#set: in pathway=map01100|map00564|map01110|map04070}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=manual-reaction_to_add_delete}}
+
−
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}
+

Latest revision as of 16:16, 21 March 2018

Pathway map00710

  • common_name:
    • Carbon fixation in photosynthetic organisms
  • Synonym(s):

Reaction(s) found

18 reactions found over 71 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=Map00710&oldid=6503"