Difference between revisions of "Map00730"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TMDK1 TMDK1] == * direction: ** LEFT-TO-RIGHT * common name: ** Thymidine kinase (ATP:thymidine) *...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730] == * common_name: ** Thiamine metabolism * Synonym(s): == Reaction(s) found == ''...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/TMDK1 TMDK1] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** Thiamine metabolism
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* common name:
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** Thymidine kinase (ATP:thymidine)
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''8''' reactions found over '''24''' reactions in the full pathway
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** 1.0 [[atp]][c] '''+''' 1.0 [[thymd]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[dtmp]][c]
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* [[ADK1]]
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* With common name(s):
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** 1 associated gene(s):
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** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Thymidine C10H14N2O5[c] '''=>''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 DTMP C10H13N2O8P[c]
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*** [[B471_RS0119710]]
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** 3 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-cljungdahlii]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-bsubtilis]]
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* [[B471_RS23565]]
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*** [[orthology-aferrooxidans]]
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** [[pantograph]]-[[bsubtilis]]
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* [[ADK2]]
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== Pathways  ==
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** 1 associated gene(s):
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* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
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*** [[B471_RS0119710]]
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** '''68''' reactions found over '''244''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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*** [[orthology-cljungdahlii]]
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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*** [[orthology-bsubtilis]]
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* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
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* [[DADK]]
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** '''22''' reactions found over '''72''' reactions in the full pathway
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** 1 associated gene(s):
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== Reconstruction information  ==
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*** [[B471_RS0119710]]
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* Category: [[orthology]]
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** 2 reconstruction source(s) associated:
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** Source: [[orthology-bsubtilis]]
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*** [[orthology-cljungdahlii]]
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*** Tool: [[pantograph]]
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*** [[orthology-bsubtilis]]
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* [[DXPS]]
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** 1 associated gene(s):
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*** [[B471_RS0101820]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[PMPK]]
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** 1 associated gene(s):
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*** [[B471_RS0108570]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[TMK]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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* [[TMPK]]
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** 1 associated gene(s):
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*** [[B471_RS0105400]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[TMPPP]]
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** 1 associated gene(s):
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*** [[B471_RS0108575]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/ADK1m ADK1m]
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* [http://bigg.ucsd.edu/universal/reactions/ATAMh ATAMh]
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* [http://bigg.ucsd.edu/universal/reactions/ATDAMh ATDAMh]
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* [http://bigg.ucsd.edu/universal/reactions/ATDAMm ATDAMm]
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* [http://bigg.ucsd.edu/universal/reactions/DXS DXS]
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* [http://bigg.ucsd.edu/universal/reactions/HETZK HETZK]
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* [http://bigg.ucsd.edu/universal/reactions/HMPK1 HMPK1]
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* [http://bigg.ucsd.edu/universal/reactions/TDP TDP]
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* [http://bigg.ucsd.edu/universal/reactions/TDPm TDPm]
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* [http://bigg.ucsd.edu/universal/reactions/THMP THMP]
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* [http://bigg.ucsd.edu/universal/reactions/THMPe THMPe]
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* [http://bigg.ucsd.edu/universal/reactions/THMTP THMTP]
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* [http://bigg.ucsd.edu/universal/reactions/TMDPK TMDPK]
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* [http://bigg.ucsd.edu/universal/reactions/TMDPPK TMDPPK]
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* [http://bigg.ucsd.edu/universal/reactions/TMN TMN]
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* [http://bigg.ucsd.edu/universal/reactions/TYRL TYRL]
 
== External links  ==
 
== External links  ==
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* EC Number : 2.7.1.145
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{{#set: common_name=Thiamine metabolism}}
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* BioCyc : META:THYKI-RXN
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{{#set: reaction found=8}}
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* MetaNetX (MNX) Equation : MNXR104885
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{{#set: total reaction=24}}
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* RHEA:
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{{#set: completion rate=33.0}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19129 19129]
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* Reactome : REACT_R-ATH-73632
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* KEGG Reaction : R01567
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Thymidine kinase (ATP:thymidine)}}
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{{#set: gene associated=B471_RS23565}}
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{{#set: in pathway=map00240|map01100|map00983}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-bsubtilis}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 16:15, 21 March 2018

Pathway map00730

  • common_name:
    • Thiamine metabolism
  • Synonym(s):

Reaction(s) found

8 reactions found over 24 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=Map00730&oldid=6419"