Difference between revisions of "Map00920"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ABUTt2r_CUT ABUTt2r_CUT] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * W...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00920 map00920] == * common_name: ** Sulfur metabolism * Synonym(s): == Reaction(s) found == '''5...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ABUTt2r_CUT ABUTt2r_CUT] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00920 map00920] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** Sulfur metabolism
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''56''' reactions in the full pathway
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** 1.0 [[h]][e] '''+''' 1.0 [[4abut]][e] '''=>''' 1.0 [[4abut]][c] '''+''' 1.0 [[h]][c]
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* [[BPNT]]
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* With common name(s):
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** 1 associated gene(s):
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** 1.0 H+[e] '''+''' 1.0 4-Aminobutanoate[e] '''=>''' 1.0 4-Aminobutanoate[c] '''+''' 1.0 H+[c]
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*** [[B471_RS0101420]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-aferrooxidans]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[CYSS]]
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* [[B471_RS0101195]]
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** 3 associated gene(s):
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** missing_rxn_creator
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*** [[B471_RS0106095]]
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* [[B471_RS0105160]]
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*** [[B471_RS0104440]]
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** missing_rxn_creator
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*** [[B471_RS0108360]]
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== Pathways  ==
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** 2 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[orthology-cljungdahlii]]
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* Category: [[manual]]
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*** [[orthology-aferrooxidans]]
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** Source: [[manual-missing_rxn_creator]]
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* [[SERAT]]
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*** Comment: [[reaction found from orthology but we fixed reversibility based on biological expertise]]
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** 1 associated gene(s):
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*** [[B471_RS0118445]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[SHSL2r]]
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** 1 associated gene(s):
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*** [[B471_RS20990]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[TAURabc]]
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** 4 associated gene(s):
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*** [[B471_RS0116265]]
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*** [[B471_RS0114570]]
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*** [[B471_RS0116270]]
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*** [[B471_RS0114565]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/AASPh AASPh]
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* [http://bigg.ucsd.edu/universal/reactions/AASPm AASPm]
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* [http://bigg.ucsd.edu/universal/reactions/ACHMSSELCYSL ACHMSSELCYSL]
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* [http://bigg.ucsd.edu/universal/reactions/ACHMSSELCYSLh ACHMSSELCYSLh]
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* [http://bigg.ucsd.edu/universal/reactions/ACSERL ACSERL]
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* [http://bigg.ucsd.edu/universal/reactions/ACSERLh ACSERLh]
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* [http://bigg.ucsd.edu/universal/reactions/ACSERLm ACSERLm]
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* [http://bigg.ucsd.edu/universal/reactions/ACSERSULL ACSERSULL]
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* [http://bigg.ucsd.edu/universal/reactions/ACSERSULLh ACSERSULLh]
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* [http://bigg.ucsd.edu/universal/reactions/ACSERSULLm ACSERSULLm]
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* [http://bigg.ucsd.edu/universal/reactions/ADSELK ADSELK]
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* [http://bigg.ucsd.edu/universal/reactions/ADSK ADSK]
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* [http://bigg.ucsd.edu/universal/reactions/AHSL AHSL]
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* [http://bigg.ucsd.edu/universal/reactions/BPNT2 BPNT2]
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* [http://bigg.ucsd.edu/universal/reactions/CYANST CYANST]
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* [http://bigg.ucsd.edu/universal/reactions/CYANSTm CYANSTm]
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* [http://bigg.ucsd.edu/universal/reactions/CYANSTpp CYANSTpp]
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* [http://bigg.ucsd.edu/universal/reactions/CYSS_1 CYSS_1]
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* [http://bigg.ucsd.edu/universal/reactions/FDMO FDMO]
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* [http://bigg.ucsd.edu/universal/reactions/FDMO2 FDMO2]
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* [http://bigg.ucsd.edu/universal/reactions/FDMO4 FDMO4]
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* [http://bigg.ucsd.edu/universal/reactions/HSST HSST]
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* [http://bigg.ucsd.edu/universal/reactions/METB1 METB1]
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* [http://bigg.ucsd.edu/universal/reactions/PAPSR PAPSR]
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* [http://bigg.ucsd.edu/universal/reactions/PAPSR2 PAPSR2]
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* [http://bigg.ucsd.edu/universal/reactions/PAPSSH PAPSSH]
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* [http://bigg.ucsd.edu/universal/reactions/SADT SADT]
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* [http://bigg.ucsd.edu/universal/reactions/SADT2 SADT2]
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* [http://bigg.ucsd.edu/universal/reactions/SAT SAT]
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* [http://bigg.ucsd.edu/universal/reactions/SATm SATm]
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* [http://bigg.ucsd.edu/universal/reactions/SELADT SELADT]
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* [http://bigg.ucsd.edu/universal/reactions/SHSL1 SHSL1]
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* [http://bigg.ucsd.edu/universal/reactions/SHSL1h SHSL1h]
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* [http://bigg.ucsd.edu/universal/reactions/SHSL2h SHSL2h]
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* [http://bigg.ucsd.edu/universal/reactions/SLCYSS SLCYSS]
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* [http://bigg.ucsd.edu/universal/reactions/SLFAT SLFAT]
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* [http://bigg.ucsd.edu/universal/reactions/SO3R SO3R]
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* [http://bigg.ucsd.edu/universal/reactions/SUCHMSSELCYSL SUCHMSSELCYSL]
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* [http://bigg.ucsd.edu/universal/reactions/SUCHMSSELCYSLh SUCHMSSELCYSLh]
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* [http://bigg.ucsd.edu/universal/reactions/SULFOX SULFOX]
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* [http://bigg.ucsd.edu/universal/reactions/SULO SULO]
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* [http://bigg.ucsd.edu/universal/reactions/SULOm SULOm]
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* [http://bigg.ucsd.edu/universal/reactions/SULR SULR]
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* [http://bigg.ucsd.edu/universal/reactions/SULabc SULabc]
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* [http://bigg.ucsd.edu/universal/reactions/SULabcpp SULabcpp]
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* [http://bigg.ucsd.edu/universal/reactions/TAUDO TAUDO]
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* [http://bigg.ucsd.edu/universal/reactions/TAURabcpp TAURabcpp]
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* [http://bigg.ucsd.edu/universal/reactions/TSULabc TSULabc]
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* [http://bigg.ucsd.edu/universal/reactions/TSULabcpp TSULabcpp]
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* [http://bigg.ucsd.edu/universal/reactions/TSULth TSULth]
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* [http://bigg.ucsd.edu/universal/reactions/TSULtm TSULtm]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common_name=Sulfur metabolism}}
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{{#set: gene associated=B471_RS0101195|B471_RS0105160}}
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{{#set: reaction found=5}}
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{{#set: in pathway=}}
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{{#set: total reaction=56}}
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{{#set: reconstruction category=manual}}
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{{#set: completion rate=9.0}}
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{{#set: reconstruction source=manual-missing_rxn_creator}}
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{{#set: reconstruction comment=reaction found from orthology but we fixed reversibility based on biological expertise}}
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Latest revision as of 16:15, 21 March 2018

Pathway map00920

  • common_name:
    • Sulfur metabolism
  • Synonym(s):

Reaction(s) found

5 reactions found over 56 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=Map00920&oldid=6439"