Difference between revisions of "Map01110"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACOAD1 ACOAD1] == * direction: ** REVERSIBLE * common name: ** Acyl-CoA dehydrogenase (butanoyl-CoA...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DRBK_CUT DRBK_CUT] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ident...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACOAD1 ACOAD1] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/DRBK_CUT DRBK_CUT] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
* common name:
 
** Acyl-CoA dehydrogenase (butanoyl-CoA)
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h]][c] '''+''' 1.0 [[b2coa]][c] '''+''' 1.0 [[nadh]][c] '''<=>''' 1.0 [[nad]][c] '''+''' 1.0 [[btcoa]][c]
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** 1.0 [[drib]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[adp]][c] '''+''' 1.0 [[2dr5p]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H+[c] '''+''' 1.0 Crotonoyl-CoA[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''<=>''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Butanoyl-CoA[c]
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** 1.0 Deoxyribose C5H10O4[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 2-Deoxy-D-ribose 5-phosphate[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS0108385]]
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* [[B471_RS0117105]]
** [[pantograph]]-[[bsubtilis]]
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** missing_rxn_creator
* [[B471_RS0110365]]
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** [[pantograph]]-[[bsubtilis]]
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== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00310]]: [http://www.genome.jp/dbget-bin/www_bget?map00310 map00310]
 
** '''12''' reactions found over '''138''' reactions in the full pathway
 
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
** '''51''' reactions found over '''220''' reactions in the full pathway
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
** '''101''' reactions found over '''715''' reactions in the full pathway
 
* [[map00650]]: [http://www.genome.jp/dbget-bin/www_bget?map00650 map00650]
 
** '''21''' reactions found over '''156''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[manual]]
** [[pantograph]]:
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** Source: [[manual-missing_rxn_creator]]
*** [[bsubtilis]]
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*** Comment: [[reaction found from orthology but we fixed reversibility based on biological expertise]]
 
== External links  ==
 
== External links  ==
* BioCyc : META:RXN-12558
 
* MetaNetX (MNX) Equation : MNXR95305
 
* KEGG Reaction : R01171
 
* EC Number : 1.3.1.44
 
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
{{#set: common name=Acyl-CoA dehydrogenase (butanoyl-CoA)}}
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{{#set: gene associated=B471_RS0117105}}
{{#set: gene associated=B471_RS0108385|B471_RS0110365}}
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{{#set: in pathway=}}
{{#set: in pathway=map01100|map00310|map01200|map01120|map00650}}
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{{#set: reconstruction category=manual}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=manual-missing_rxn_creator}}
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction comment=reaction found from orthology but we fixed reversibility based on biological expertise}}
{{#set: reconstruction source=bsubtilis}}
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Revision as of 00:31, 21 March 2018

Reaction DRBK_CUT

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Deoxyribose C5H10O4[c] + 1.0 ATP C10H12N5O13P3[c] <=> 1.0 ADP C10H12N5O10P2[c] + 1.0 2-Deoxy-D-ribose 5-phosphate[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links