Difference between revisions of "NTD10"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ARGSS ARGSS] == * direction: ** LEFT-TO-RIGHT * common name: ** Argininosuccinate synthase * Synony...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MCTP1Aex MCTP1Aex] == * direction: ** LEFT-TO-RIGHT * common name: ** Murein crosslinking transpept...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ARGSS ARGSS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/MCTP1Aex MCTP1Aex] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Argininosuccinate synthase
+
** Murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[citr__L]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[asp__L]][c] '''=>''' 1.0 [[argsuc]][c] '''+''' 1.0 [[ppi]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[amp]][c]
+
** 1.0 [[murein5p5p]][e] '''=>''' 1.0 [[ala__D]][e] '''+''' 1.0 [[murein5px4p]][e]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 L-Citrulline[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 L-Aspartate[c] '''=>''' 1.0 N(omega)-(L-Arginino)succinate[c] '''+''' 1.0 Diphosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 AMP C10H12N5O7P[c]
+
** 1.0 Two linked disacharide pentapeptide murein units (uncrosslinked, middle of chain)[e] '''=>''' 1.0 D-Alanine[e] '''+''' 1.0 Two disacharide linked murein units, pentapeptide crosslinked tetrapeptide (A2pm->D-ala) (middle of chain)[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0117525]]
+
* [[B471_RS0107545]]
 +
** [[pantograph]]-[[cljungdahlii]]
 +
* [[B471_RS0109660]]
 +
** [[pantograph]]-[[cljungdahlii]]
 +
* [[B471_RS0113655]]
 
** [[pantograph]]-[[cljungdahlii]]
 
** [[pantograph]]-[[cljungdahlii]]
−
** [[pantograph]]-[[bsubtilis]]
 
−
** [[pantograph]]-[[aferrooxidans]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map00220]]: [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220]
 
−
** '''13''' reactions found over '''65''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''78''' reactions found over '''228''' reactions in the full pathway
 
−
* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
 
−
** '''22''' reactions found over '''93''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''148''' reactions found over '''694''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[aferrooxidans]]
+
*** Tool: [[pantograph]]
−
*** [[cljungdahlii]]
+
−
*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
−
* EC Number : 6.3.4.5
+
* MetaNetX (MNX) Equation : MNXR101426
−
* BioCyc : META:ARGSUCCINSYN-RXN
+
−
* MetaNetX (MNX) Equation : MNXR95949
+
−
* RHEA:
+
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10932 10932]
+
−
* Reactome : REACT_R-BTA-70577
+
−
* KEGG Reaction : R01954
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Argininosuccinate synthase}}
+
{{#set: common name=Murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm)}}
−
{{#set: gene associated=B471_RS0117525}}
+
{{#set: gene associated=B471_RS0107545|B471_RS0109660|B471_RS0113655}}
−
{{#set: in pathway=map01100|map00220|map01110|map01230|map00250|map01130}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=aferrooxidans|cljungdahlii|bsubtilis}}
 

Revision as of 00:42, 21 March 2018

Reaction MCTP1Aex

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Two linked disacharide pentapeptide murein units (uncrosslinked, middle of chain)[e] => 1.0 D-Alanine[e] + 1.0 Two disacharide linked murein units, pentapeptide crosslinked tetrapeptide (A2pm->D-ala) (middle of chain)[e]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR101426
"Murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm)" cannot be used as a page name in this wiki.



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