Difference between revisions of "PANTS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FUMt2r FUMt2r] == * direction: ** REVERSIBLE * common name: ** Fumarate reversible transport via sy...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PANTS PANTS] == * direction: ** LEFT-TO-RIGHT * common name: ** Pantothenate synthase * Synonym(s):...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/FUMt2r FUMt2r] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PANTS PANTS] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Fumarate reversible transport via symport
+
** Pantothenate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[fum]][e] '''+''' 1.0 [[h]][e] '''<=>''' 1.0 [[fum]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[ala_B]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[pant__R]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[ppi]][c] '''+''' 1.0 [[pnto__R]][c] '''+''' 1.0 [[amp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Fumarate[e] '''+''' 1.0 H+[e] '''<=>''' 1.0 Fumarate[c] '''+''' 1.0 H+[c]
+
** 1.0 Beta-Alanine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 (R)-Pantoate[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Diphosphate[c] '''+''' 1.0 (R)-Pantothenate[c] '''+''' 1.0 AMP C10H12N5O7P[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS23035]]
+
* Gene: [[B471_RS0101070]]
** [[pantograph]]-[[bsubtilis]]
+
** Source: [[orthology-bsubtilis]]
 +
** Source: [[orthology-aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00770]]: [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770]
 +
** '''20''' reactions found over '''75''' reactions in the full pathway
 +
* [[map00410]]: [http://www.genome.jp/dbget-bin/www_bget?map00410 map00410]
 +
** '''9''' reactions found over '''91''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-bsubtilis]]
*** [[bsubtilis]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR99713
+
* RHEA:
{{#set: direction=REVERSIBLE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10912 10912]
{{#set: common name=Fumarate reversible transport via symport}}
+
* EC Number : 6.3.2.1
{{#set: gene associated=B471_RS23035}}
+
* MetaNetX (MNX) Equation : MNXR102345
{{#set: in pathway=}}
+
* KEGG Reaction : R02473
 +
* BioCyc : META:PANTOATE-BETA-ALANINE-LIG-RXN
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Pantothenate synthase}}
 +
{{#set: gene associated=B471_RS0101070}}
 +
{{#set: in pathway=map01100|map01110|map00770|map00410}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=bsubtilis}}
 

Latest revision as of 16:41, 21 March 2018

Reaction PANTS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pantothenate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Beta-Alanine[c] + 1.0 ATP C10H12N5O13P3[c] + 1.0 (R)-Pantoate[c] => 1.0 H+[c] + 1.0 Diphosphate[c] + 1.0 (R)-Pantothenate[c] + 1.0 AMP C10H12N5O7P[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 6.3.2.1
  • MetaNetX (MNX) Equation : MNXR102345
  • KEGG Reaction : R02473
  • BioCyc : META:PANTOATE-BETA-ALANINE-LIG-RXN