Difference between revisions of "PGPP180"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RBP4E RBP4E] == * direction: ** REVERSIBLE * common name: ** L-ribulose-phosphate 4-epimerase * Syn...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PGPP180 PGPP180] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphatidylglycerol phosphate...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/RBP4E RBP4E] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PGPP180 PGPP180] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** L-ribulose-phosphate 4-epimerase
+
** Phosphatidylglycerol phosphate phosphatase (n-C18:0)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[ru5p__L]][c] '''<=>''' 1.0 [[xu5p__D]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[pgp180]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[pg180]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 L-Ribulose 5-phosphate[c] '''<=>''' 1.0 D-Xylulose 5-phosphate[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 Phosphatidylglycerophosphate (dioctadecanoyl, n-C18:0)[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 Phosphatidylglycerol (dioctadecanoyl, n-C18:0)[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[B471_RS0112070]]
 
** [[pantograph]]-[[cljungdahlii]]
 
** [[pantograph]]-[[bsubtilis]]
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''471''' reactions found over '''2349''' reactions in the full pathway
 
** '''471''' reactions found over '''2349''' reactions in the full pathway
* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
+
* [[map00564]]: [http://www.genome.jp/dbget-bin/www_bget?map00564 map00564]
** '''6''' reactions found over '''54''' reactions in the full pathway
+
** '''36''' reactions found over '''134''' reactions in the full pathway
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
** '''101''' reactions found over '''715''' reactions in the full pathway
+
* [[map00053]]: [http://www.genome.jp/dbget-bin/www_bget?map00053 map00053]
+
** '''3''' reactions found over '''50''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
+
* Category: [[manual]]
** Source: [[orthology-cljungdahlii]]
+
** Source: [[manual-reaction_to_add_delete]]
*** Tool: [[pantograph]]
+
*** Comment: [[reaction added from literature evidence or biological expertise]]
** Source: [[orthology-bsubtilis]]
+
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR102566
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22368 22368]
+
* EC Number : 3.1.3.27
* EC Number : 5.1.3.4
+
{{#set: direction=LEFT-TO-RIGHT}}
* MetaNetX (MNX) Equation : MNXR103434
+
{{#set: common name=Phosphatidylglycerol phosphate phosphatase (n-C18:0)}}
* KEGG Reaction : R05850
+
{{#set: in pathway=map01100|map00564}}
* BioCyc : META:RIBULPEPIM-RXN
+
{{#set: reconstruction category=manual}}
{{#set: direction=REVERSIBLE}}
+
{{#set: reconstruction source=manual-reaction_to_add_delete}}
{{#set: common name=L-ribulose-phosphate 4-epimerase}}
+
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}
{{#set: gene associated=B471_RS0112070}}
+
{{#set: in pathway=map01100|map00040|map01120|map00053}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
+
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 16:36, 21 March 2018

Reaction PGPP180

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphatidylglycerol phosphate phosphatase (n-C18:0)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 Phosphatidylglycerophosphate (dioctadecanoyl, n-C18:0)[c] => 1.0 Phosphate[c] + 1.0 Phosphatidylglycerol (dioctadecanoyl, n-C18:0)[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR102566
  • EC Number : 3.1.3.27