Difference between revisions of "PSD180"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/gly gly] == * common name: ** Glycine * Synonym(s): == Reaction(s) known to consume the comp...")
 
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550] == * common_name: ** Peptidoglycan biosynthesis * Synonym(s): == Reaction(s) found...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Pathway]]
−
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/gly gly] ==
+
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550] ==
−
* common name:
+
* common_name:
−
** Glycine
+
** Peptidoglycan biosynthesis
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction(s) found ==
−
* [[BIOMASS]]
+
'''14''' reactions found over '''27''' reactions in the full pathway
−
* [[GLYO]]
+
* [[ALAALAr]]
−
* [[PRAGSr_CUT]]
+
** 1 associated gene(s):
−
* [[GLYCL]]
+
*** [[B471_RS0112130]]
−
* [[EX_gly]]
+
** 3 reconstruction source(s) associated:
−
* [[GLYt2r_CUT]]
+
*** [[orthology-cljungdahlii]]
−
* [[GLYO1]]
+
*** [[orthology-bsubtilis]]
−
== Reaction(s) known to produce the compound ==
+
*** [[orthology-aferrooxidans]]
−
* [[ALDD31_1]]
+
* [[MDDCP1ex]]
−
* [[GLYt2r_CUT]]
+
** 1 associated gene(s):
−
* [[SARCOX]]
+
*** [[B471_RS0101180]]
−
== Reaction(s) of unknown directionality ==
+
** 1 reconstruction source(s) associated:
−
* [[GHMT2r]]
+
*** [[orthology-cljungdahlii]]
−
* [[THRAi_CUT]]
+
* [[MDDCP2ex]]
−
* [[GLYAT]]
+
** 1 associated gene(s):
−
* [[AMPTASECG_CUT]]
+
*** [[B471_RS0101180]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
* [[MDDCP3ex]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0101180]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
* [[MDDCP4ex]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0101180]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
* [[MDDCP5ex]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0101180]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
* [[PAPPT3]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0108980]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[UAAGDS]]
 +
** 2 associated gene(s):
 +
*** [[B471_RS0102460]]
 +
*** [[B471_RS0108970]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[UAGCVT]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0105355]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[UAGPT3]]
 +
** 2 associated gene(s):
 +
*** [[B471_RS0108585]]
 +
*** [[B471_RS0108990]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
* [[UAMAGS]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0109185]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[UAMAS]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0105365]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[UAPGR]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0108995]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[UGMDDS]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS21735]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
== Reaction(s) not found ==
 +
* [http://bigg.ucsd.edu/universal/reactions/MDDCP1pp MDDCP1pp]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDDCP2pp MDDCP2pp]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDDCP3pp MDDCP3pp]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDDCP4pp MDDCP4pp]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDDCP5pp MDDCP5pp]
 +
* [http://bigg.ucsd.edu/universal/reactions/PAPPT1 PAPPT1]
 +
* [http://bigg.ucsd.edu/universal/reactions/PAPPT2 PAPPT2]
 +
* [http://bigg.ucsd.edu/universal/reactions/UAAGLS1 UAAGLS1]
 +
* [http://bigg.ucsd.edu/universal/reactions/UAAGLS2 UAAGLS2]
 +
* [http://bigg.ucsd.edu/universal/reactions/UAGPT1 UAGPT1]
 +
* [http://bigg.ucsd.edu/universal/reactions/UAGPT2 UAGPT2]
 +
* [http://bigg.ucsd.edu/universal/reactions/UGLDDS1 UGLDDS1]
 +
* [http://bigg.ucsd.edu/universal/reactions/UGLDDS2 UGLDDS2]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=Glycine}}
+
{{#set: common_name=Peptidoglycan biosynthesis}}
−
{{#set: consumed by=BIOMASS|GLYO|PRAGSr_CUT|GLYCL|EX_gly|GLYt2r_CUT|GLYO1}}
+
{{#set: reaction found=14}}
−
{{#set: produced by=ALDD31_1|GLYt2r_CUT|SARCOX}}
+
{{#set: total reaction=27}}
−
{{#set: consumed or produced by=GHMT2r|THRAi_CUT|GLYAT|AMPTASECG_CUT}}
+
{{#set: completion rate=52.0}}

Revision as of 00:49, 21 March 2018

Pathway map00550

  • common_name:
    • Peptidoglycan biosynthesis
  • Synonym(s):

Reaction(s) found

14 reactions found over 27 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=PSD180&oldid=4332"