Difference between revisions of "PSD181"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/EDD EDD] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-phosphogluconate dehydratase * Synony...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PSD181 PSD181] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphatidylserine decarboxylase...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/EDD EDD] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PSD181 PSD181] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 6-phosphogluconate dehydratase
+
** Phosphatidylserine decarboxylase (n-C18:1)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[6pgc]][c] '''=>''' 1.0 [[2ddg6p]][c] '''+''' 1.0 [[h2o]][c]
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** 1.0 [[ps181]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[co2]][c] '''+''' 1.0 [[pe181]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 6-Phospho-D-gluconate[c] '''=>''' 1.0 2-Dehydro-3-deoxy-D-gluconate 6-phosphate[c] '''+''' 1.0 H2O H2O[c]
+
** 1.0 Phosphatidylserine (dioctadec-11-enoyl, n-C18:1)[c] '''+''' 1.0 H+[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 1.0 Phosphatidylethanolamine (dioctadec-11-enoyl, n-C18:1)[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[B471_RS0109235]]
 
−
** [[pantograph]]-[[aferrooxidans]]
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''472''' reactions found over '''2349''' reactions in the full pathway
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
+
* [[map00564]]: [http://www.genome.jp/dbget-bin/www_bget?map00564 map00564]
−
** '''20''' reactions found over '''69''' reactions in the full pathway
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** '''36''' reactions found over '''134''' reactions in the full pathway
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''51''' reactions found over '''220''' reactions in the full pathway
+
** '''212''' reactions found over '''1054''' reactions in the full pathway
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
−
** '''101''' reactions found over '''715''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
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** Source: [[manual-reaction_to_add_delete]]
−
*** [[aferrooxidans]]
+
*** Comment: [[reaction added from literature evidence or biological expertise]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR103235
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17277 17277]
+
* EC Number : 4.1.1.65
−
* BioCyc : META:PGLUCONDEHYDRAT-RXN
+
−
* MetaNetX (MNX) Equation : MNXR97898
+
−
* KEGG Reaction : R02036
+
−
* EC Number : 4.2.1.12
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=6-phosphogluconate dehydratase}}
+
{{#set: common name=Phosphatidylserine decarboxylase (n-C18:1)}}
−
{{#set: gene associated=B471_RS0109235}}
+
{{#set: in pathway=map01100|map00564|map01110}}
−
{{#set: in pathway=map01100|map00030|map01200|map01120}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=manual-reaction_to_add_delete}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}
−
{{#set: reconstruction source=aferrooxidans}}
+

Latest revision as of 16:36, 21 March 2018

Reaction PSD181

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphatidylserine decarboxylase (n-C18:1)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Phosphatidylserine (dioctadec-11-enoyl, n-C18:1)[c] + 1.0 H+[c] => 1.0 CO2 CO2[c] + 1.0 Phosphatidylethanolamine (dioctadec-11-enoyl, n-C18:1)[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR103235
  • EC Number : 4.1.1.65




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