Difference between revisions of "PSSA180"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330] == * common_name: ** Arginine and proline metabolism * Synonym(s): == Reaction(s)...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PSSA180 PSSA180] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphatidylserine syntase (n-C...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PSSA180 PSSA180] ==
−
* common_name:
+
* direction:
−
** Arginine and proline metabolism
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** Phosphatidylserine syntase (n-C18:0)
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''19''' reactions found over '''149''' reactions in the full pathway
+
* With identifiers:
−
* [[ABUTD]]
+
** 1.0 [[cdpdodecg]][c] '''+''' 1.0 [[ser__L]][c] '''=>''' 1.0 [[cmp]][c] '''+''' 1.0 [[ps180]][c] '''+''' 1.0 [[h]][c]
−
** 2 associated gene(s):
+
* With common name(s):
−
*** [[B471_RS0119455]]
+
** 1.0 CDP-1,2-dioctadecanoylglycerol[c] '''+''' 1.0 L-Serine[c] '''=>''' 1.0 CMP C9H12N3O8P[c] '''+''' 1.0 Phosphatidylserine (dioctadecanoyl, n-C18:0)[c] '''+''' 1.0 H+[c]
−
*** [[B471_RS0115620]]
+
 
−
** 1 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
−
*** [[orthology-bsubtilis]]
+
== Pathways  ==
−
* [[ADMDC]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** 1 associated gene(s):
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
*** [[B471_RS0100905]]
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* [[map00564]]: [http://www.genome.jp/dbget-bin/www_bget?map00564 map00564]
−
** 3 reconstruction source(s) associated:
+
** '''36''' reactions found over '''134''' reactions in the full pathway
−
*** [[orthology-cljungdahlii]]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
*** [[orthology-bsubtilis]]
+
** '''212''' reactions found over '''1054''' reactions in the full pathway
−
*** [[orthology-aferrooxidans]]
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* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
−
* [[AGMT]]
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** '''24''' reactions found over '''133''' reactions in the full pathway
−
** 1 associated gene(s):
+
== Reconstruction information  ==
−
*** [[B471_RS0113670]]
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* Category: [[manual]]
−
** 1 reconstruction source(s) associated:
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** Source: [[manual-reaction_to_add_delete]]
−
*** [[orthology-bsubtilis]]
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*** Comment: [[reaction added from literature evidence or biological expertise]]
−
* [[ARGDC]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS21410]]
+
−
*** [[B471_RS21240]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[ARGN]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0119575]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
* [[ASPTA]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0109180]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[CSND]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0110635]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
* [[DALAOX]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0117705]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[G5SADs]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[manual-reaction_to_add_delete]]
+
−
* [[G5SD]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0101260]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[GLU5K]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0101265]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[MCSNAH]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0110870]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[ORNDC]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS21410]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
* [[P5CD]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0100095]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[P5CR]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS21630]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[PRO1x]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0119645]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[PTRCTA]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0110025]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
* [[SPMS]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0113665]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
* [[SPRMS]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0113665]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
== Reaction(s) not found ==
+
−
* [http://bigg.ucsd.edu/universal/reactions/3HXKYNOXDA 3HXKYNOXDA]
+
−
* [http://bigg.ucsd.edu/universal/reactions/3MOXTYROX 3MOXTYROX]
+
−
* [http://bigg.ucsd.edu/universal/reactions/3SALATAi 3SALATAi]
+
−
* [http://bigg.ucsd.edu/universal/reactions/3SALATAim 3SALATAim]
+
−
* [http://bigg.ucsd.edu/universal/reactions/41R1H2MAE12BOOX 41R1H2MAE12BOOX]
+
−
* [http://bigg.ucsd.edu/universal/reactions/41R2A1H12BOOX 41R2A1H12BOOX]
+
−
* [http://bigg.ucsd.edu/universal/reactions/4ABUTD 4ABUTD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/4HGLSD 4HGLSD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/4HGLSDm 4HGLSDm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOX 5HOXINDACTOX]
+
−
* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOXm 5HOXINDACTOXm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/5HOXINOXDA 5HOXINOXDA]
+
−
* [http://bigg.ucsd.edu/universal/reactions/5HXKYNOXDA 5HXKYNOXDA]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AABHH AABHH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AABTN AABTN]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AATC AATC]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AATG AATG]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AATGm AATGm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ABOR ABOR]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ABUTDm ABUTDm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AGDI AGDI]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AGDIn AGDIn]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AGMDA AGMDA]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AGMTm AGMTm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ALATA_D ALATA_D]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ALDD20x ALDD20x]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ALDD20xm ALDD20xm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ALDH ALDH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AMID AMID]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AMID2 AMID2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AMID3 AMID3]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AMID4 AMID4]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AMID5 AMID5]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AMID_1 AMID_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AMPTASECG AMPTASECG]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AMPTASECGe AMPTASECGe]
+
−
* [http://bigg.ucsd.edu/universal/reactions/APAPTm APAPTm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/APCS APCS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/APRTO2 APRTO2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ARGDCm ARGDCm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ARGDCpp ARGDCpp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ARGNm ARGNm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ARUH ARUH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASAPT ASAPT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASPATh ASPATh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASPTAm ASPTAm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASPTAp ASPTAp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AST AST]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CK CK]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CKc CKc]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CMPA CMPA]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CRTNh CRTNh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CRTNsyn CRTNsyn]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CSPMDDC CSPMDDC]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CSPMDDH CSPMDDH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DALAOXx DALAOXx]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DARGOp DARGOp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DDMCITALOR DDMCITALOR]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DIAT DIAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DMCITALOR DMCITALOR]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DORNOp DORNOp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DPROOp DPROOp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/EHGLAT EHGLAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/EHGLATm EHGLATm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/EHGLATp EHGLATp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/G5DHx G5DHx]
+
−
* [http://bigg.ucsd.edu/universal/reactions/G5SADrm G5SADrm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/G5SD2 G5SD2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/G5SDym G5SDym]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GACMTRc GACMTRc]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GDBTALDH GDBTALDH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GGGABADr GGGABADr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GGGABAH GGGABAH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GGPTRCS GGPTRCS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLACO GLACO]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLACOm GLACOm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLU5Km GLU5Km]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLYALDDr GLYALDDr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLYAMDTRc GLYAMDTRc]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLYOp GLYOp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GUDBUTNAH GUDBUTNAH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HPROa HPROa]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HPROb HPROb]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HPROx HPROx]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HPROxm HPROxm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HPROym HPROym]
+
−
* [http://bigg.ucsd.edu/universal/reactions/IMACTD IMACTD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/IMACTD_m IMACTD_m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LALGP LALGP]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LCYSTAT LCYSTAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LCYSTATm LCYSTATm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MAOLNOR MAOLNOR]
+
−
* [http://bigg.ucsd.edu/universal/reactions/NABTNO NABTNO]
+
−
* [http://bigg.ucsd.edu/universal/reactions/NABTNOm NABTNOm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/NOPD NOPD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/NOS NOS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/NOS1 NOS1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/NOS2 NOS2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/NOS2_1 NOS2_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OARGDC OARGDC]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ORDCh ORDCh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ORNCD ORNCD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ORNTA ORNTA]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ORNTArm ORNTArm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/P5CDm P5CDm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/P5CRm P5CRm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/P5CRx P5CRx]
+
−
* [http://bigg.ucsd.edu/universal/reactions/P5CRxm P5CRxm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PHCD PHCD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PHCDm PHCDm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PHCHGS PHCHGS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PHCHGSm PHCHGSm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/POLYAO2 POLYAO2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/POLYAO3 POLYAO3]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PRO1xm PRO1xm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PRO1y PRO1y]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PROAKGOX1 PROAKGOX1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PROAKGOX1r PROAKGOX1r]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PROD2 PROD2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PROD2m PROD2m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PTRCAT1 PTRCAT1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PUTA3 PUTA3]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PYLALDOX PYLALDOX]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PYLALDOXm PYLALDOXm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SADH SADH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SGDS SGDS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SGSAD SGSAD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SOTA SOTA]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SPMDAT1 SPMDAT1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SPMDAT2 SPMDAT2]
+
 
== External links  ==
 
== External links  ==
−
{{#set: common_name=Arginine and proline metabolism}}
+
* MetaNetX (MNX) Equation : MNXR103271
−
{{#set: reaction found=19}}
+
* EC Number : 2.7.8.8
−
{{#set: total reaction=149}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: completion rate=13.0}}
+
{{#set: common name=Phosphatidylserine syntase (n-C18:0)}}
 +
{{#set: in pathway=map01100|map00564|map01110|map00260}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=manual-reaction_to_add_delete}}
 +
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}

Latest revision as of 16:37, 21 March 2018

Reaction PSSA180

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphatidylserine syntase (n-C18:0)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 CDP-1,2-dioctadecanoylglycerol[c] + 1.0 L-Serine[c] => 1.0 CMP C9H12N3O8P[c] + 1.0 Phosphatidylserine (dioctadecanoyl, n-C18:0)[c] + 1.0 H+[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR103271
  • EC Number : 2.7.8.8




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