Difference between revisions of "Paps"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UCMAT_AFE UCMAT_AFE] == * direction: ** LEFT-TO-RIGHT * common name: ** undecaprenyldiphospho-muram...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/EAR160y_CUT EAR160y_CUT] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/UCMAT_AFE UCMAT_AFE] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/EAR160y_CUT EAR160y_CUT] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
* common name:
+
** undecaprenyldiphospho-muramoylpentapeptide ?-N-acetylglucosaminyltransferase
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[uagmda]][c] '''+''' 1.0 [[uacgam]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[udp]][c] '''+''' 1.0 [[ugmdal]][c]
+
** 1.0 [[tpalm2eACP]][c] '''+''' 1.0 [[nadph]][c] '''+''' 1.0 [[h]][c] '''<=>''' 1.0 [[palmACP]][c] '''+''' 1.0 [[nadp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''+''' 1.0 UDP-N-acetyl-D-glucosamine[c] '''=>''' 1.0 H+[c] '''+''' 1.0 UDP C9H11N2O12P2[c] '''+''' 1.0 Undecaprenyl-diphospho-N-acetylmuramoyl-L-ala-D-glu-meso-2,6-diaminopimeloyl-D-ala-D-ala[c]
+
** 1.0 Trans-Hexadec-2-enoyl-[acyl-carrier protein][c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 H+[c] '''<=>''' 1.0 Palmitoyl-ACP (n-C16:0ACP)[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS0108990]]
+
* [[B471_RS0108775]]
** [[pantograph]]-[[aferrooxidans]]
+
** missing_rxn_creator
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[manual]]
** [[pantograph]]:
+
** Source: [[manual-missing_rxn_creator]]
*** [[aferrooxidans]]
+
*** Comment: [[reaction found from orthology but we fixed reversibility based on biological expertise]]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
{{#set: common name=undecaprenyldiphospho-muramoylpentapeptide ?-N-acetylglucosaminyltransferase}}
+
{{#set: gene associated=B471_RS0108775}}
{{#set: gene associated=B471_RS0108990}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=manual-missing_rxn_creator}}
{{#set: reconstruction source=aferrooxidans}}
+
{{#set: reconstruction comment=reaction found from orthology but we fixed reversibility based on biological expertise}}

Revision as of 00:33, 21 March 2018

Reaction EAR160y_CUT

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Trans-Hexadec-2-enoyl-[acyl-carrier protein][c] + 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] + 1.0 H+[c] <=> 1.0 Palmitoyl-ACP (n-C16:0ACP)[c] + 1.0 Nicotinamide adenine dinucleotide phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links