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The query [[Category:Reaction]] [[Reconstruction category::Manual]] was answered by the SMWSQLStore3 in 0.0794 seconds.

Results 51 – 403    (Previous 500 | Next 500)   (20 | 50 | 100 | 250 | 500)   (JSON | CSV | RSS | RDF)
 Common nameEc numberReconstruction categoryReconstruction toolReconstruction sourceReconstruction commentGene associatedIn pathway
AMPMS24-amino-2-methyl-5-phosphomethylpyrimidine synthetaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
AMPTASECG CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0103975
ANHMK1,6-anhydrous-N-Acetylmuramate kinaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
AOXSr28-amino-7-oxononanoate synthaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00780
Map01120
APG3PAT120Acyl-phosphate:glycerol-3-phosphate acyltransferase (C12:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
APG3PAT140Acyl-phosphate:glycerol-3-phosphate acyltransferase (C14:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
APG3PAT141Acyl-phosphate:glycerol-3-phosphate acyltransferase (C14:1)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
APG3PAT160Acyl-phosphate:glycerol-3-phosphate acyltransferase (C16:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
APG3PAT161Acyl-phosphate:glycerol-3-phosphate acyltransferase (C16:1)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
APG3PAT180Acyl-phosphate:glycerol-3-phosphate acyltransferase (C18:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
APG3PAT181Acyl-phosphate:glycerol-3-phosphate acyltransferase (C18:1)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
APSRAdenosine 5'-phosphosulfate reductase;ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
ASNt2rL asparagine reversible transport via proton symportManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
ASP4DCAspartate 4-decarboxylaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00270
Map00250
Map01230
ASPt2r CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertise
ATPM CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertise
ATPSXrppManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
BACCLBiotin acetyl CoA carboxylase ligaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00780
BALAt2r CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0101195
B471 RS0105160
BIOMASSManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
BTCOARx CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0113260
B471 RS0119455
B471 RS0100095
B471 RS0110020
B471 RS0115620
BTDt RRR R butanediol transportManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
BTNt2i CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS20185
BTOHt CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertise
BTS4Biotin synthaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00780
BUTKrButyrate kinaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00650
BUTt CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertise
CA2abcCalcium transport via ABC systemManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
CA2tCalcium (Ca+2) transport via diffusion (extracellular to periplasm)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
CITRt2rCitrulline reversible transport via proton symportManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
CLPNS120Cardiolipin synthase (n-C12:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
CLPNS140Cardiolipin synthase (n-C14:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
CLPNS160Cardiolipin synthase (n-C16:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
CLPNS161Cardiolipin synthase (n-C16:1)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
CLPNS180Cardiolipin synthase (n-C18:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
CLPNS181Cardiolipin synthase (n-C18:1)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
CLt3r 2Chloride transport via proton antiport (2:1) (periplasm)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
CO2tCO2 transporter via diffusionManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
COB1NDAAT1Cob I yrinate a c diamide adenosyltransferase 1ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
COB2NDARED CUTManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
CODHManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
COabcCobalt transport via ABC systemManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
COtCO transporter via diffusionManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
CPC2MTPrecorrin-2 C20-methyltransferaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00860
CPC3MTPrecorrin-3B C17-methyltransferaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00860
CPC4MTPrecorrin-4 C11-methyltransferaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00860
CPC5MTPrecorrin-5 C1-methyltransferaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
CPC6MTPrecorrin-6Y C5,15-methyltransferase (decarboxylating)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
CPC6RPrecorrin-6A reductaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00860
CPC8MMPrecorrin-8X methylmutaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00860
CPPPGO2 CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0118845
CPPPGOAN2 CUTManualManual-missing rxn creatorReactions originally found with orthology but modified following biological expertiseB471 RS0118845
CU2tManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
CYRDAR CUTManualManual-missing rxn creatorReactions originally found with orthology but modified following biological expertise
CYRDASCob(II)yrinate a,c-diamide synthase (glutamine-hydrolysing)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
CYSTLCystathionine b-lyaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
CYSTSCystathionine beta synthaseManual
Orthology		PantographOrthology-cljungdahlii
Manual-reaction to add delete		Reaction added from literature evidence or biological expertiseB471 RS0108360
B471 RS0104440		Map01100
Map00270
Map00260
Map01230
Map01130
CYSabcL-cysteine transport via ABC systemManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
CYT1ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
CYT2ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
CYTA2ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
CYTAA31ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
CYTBC1ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
CYTBD CUTManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
CuabcCopper transport via ABC systemManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
DALAt2r CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0101195
B471 RS0105160
DASYN120CDP-diacylglycerol synthetase (n-C12:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
Map01110
Map04070
DASYN140CDP-diacylglycerol synthetase (n-C14:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
Map01110
Map04070
DASYN141CDP-diacylglycerol synthetase (n-C14:1)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap04070
Map00564
Map01110
Map01100
DASYN160CDP-diacylglycerol synthetase (n-C16:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01110
Map00564
Map04070
Map01100
DASYN161CDP-diacylglycerol synthetase (n-C16:1)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
Map01110
Map04070
DASYN180CDP-diacylglycerol synthetase (n-C18:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
Map04070
Map01110
DASYN181CDP-diacylglycerol synthetase (n-C18:1)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap04070
Map00564
Map01110
Map01100
DHFRDihydrofolate reductaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00670
Map00790
DHORDi CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertise
DHPTDCs24,5-dihydroxy-2,3-pentanedione cyclization (spontaneous)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
DHQTi CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0101925
DM amobManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
DM hpalManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
DM mththfManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
DM succManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
DNMPPADihydroneopterin monophosphate dephosphorylaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap00790
DNTPPADihydroneopterin triphosphate pyrophosphataseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap00790
DRBK CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0117105
DSERt2 CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0101195
B471 RS0105160
EAR100y CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0108775
EAR120y CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0108775
EAR121yManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00780
Map00061
EAR140y CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0108775
EAR141yManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00780
Map00061
EAR160y CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0108775
EAR161yManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00780
Map00061
EAR180yManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00780
Map00061
EAR181yManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00780
Map00061
EAR40yManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map01212
Map00061
EAR60y CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0108775
EAR80y CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0108775
ECOAH13-hydroxyacyl-CoA dehydratase (3-hydroxybutanoyl-CoA)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00630
Map00310
Map01200
Map01120
Map00650
Map00627
Map01212
Map00720
Map00362
Map00071
Map01130
Map00380
ECOAH2c CUTManualManual-missing rxn creatorReactions originally found with orthology but modified following biological expertiseB471 RS0110785
B471 RS0115580
ETOHtEthanol reversible transportManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
EX SO4aaManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX acManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX ala DManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX alaalaManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX alltnManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX arab LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX araban LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX arg LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX asn LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX asp LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX btd RRManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX btnManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX btohManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX butManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX ca2ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX citr LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX clManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX coManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX co2ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX cobalt2ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX csnManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX cu2ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX cys LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX etohManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX fe2ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX fe3ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX folManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX forManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX fruManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX galManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX galctn DManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX galurManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX glc DManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX glcnManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX glcurManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX gln LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX glu LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX glyManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX glybManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX glycManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX gsshManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX hManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX h2ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX h2oManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX h2sManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX his LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX ile LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX kManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX lac DManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX lac LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX leu LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX lys LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX maltManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX malthxManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX malttrManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX manManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX met LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX mg2ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX mn2ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX mobdManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX murein4p3pManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX murein4p4pManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX murein4px4pManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX murein4px4px4pManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX murein5p3pManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX murein5p4pManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX murein5p5pManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX murein5p5p5pManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX murein5px3pManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX murein5px4pManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX murein5px4px4pManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX na1ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX nh4ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX ni2ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX no2ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX no3ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX o2ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX piManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX pro LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX ptrcManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX pydxnManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX pyrManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX rib DManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX ribflvManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX rmnManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX sManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX ser DManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX ser LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX so4ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX spmdManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX taurManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX thmManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX trp LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX tsulManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX tttonManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX uaagmdaManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX udcpdpManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX udcppManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX uraManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX val LManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX xanManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX xyl DManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
EX zn2ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
F6PBManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
FBA3Sedoheptulose 1,7-bisphosphate D-glyceraldehyde-3-phosphate-lyaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map01110
Map01120
Map01200
Map00051
Map00710
Map00680
Map00010
Map01130
Map00030
FBPFructose-bisphosphataseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map01110
Map01120
Map01200
Map00051
Map00710
Map00680
Map00010
Map01130
Map00030
FCLT CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0117735
FDH7 CUTManualManual-missing rxn creatorReactions originally found with orthology but modified following biological expertiseB471 RS0117570
FE2abcIron (II) transport via ABC systemManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
FE2t2ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
FE3tFerric iron uptake, plasma membraneManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
FGLUFormimidoylglutamaseManualReaction added from cljungdahlii networkMap01100
Map00340
FMNRx2FMN reductaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00740
FOLR2Folate reductaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00670
Map00790
FOLtFolate transport via proton simportManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
FRNDPR2r CUTManualManual-missing rxn creatorReactions originally found with orthology but modified following biological expertiseB471 RS0103585
FRUptsD-fructose transport via PEP:Pyr PTSManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
G3PCTGlycerol-3-phosphate cytidylyltransferaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap00564
G5SADsL-glutamate 5-semialdehyde dehydratase (spontaneous)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map01110
Map00330
Map00332
Map01230
Map01130
GALKr CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS21095
GLCRt2r CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0115825
GLCt2 CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertise
GLNabcL-glutamine transport via ABC systemManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
GLUDxi CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0108910
GLUSyGlutamate synthase (NADPH)Manual
Orthology		PantographOrthology-cljungdahlii
Orthology-bsubtilis
Orthology-aferrooxidans
Manual-reaction to add delete		Reaction added from literature evidence or biological expertiseB471 RS0109970
B471 RS0105685
B471 RS0115910
B471 RS0103585		Map01100
Map01110
Map01120
Map00910
Map01230
Map00250
Map01130
GLUabcL-glutamate transport via ABC systemManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
GLXCLGlyoxalate carboligaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00630
GLYALDDr CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0115620
B471 RS0119455
GLYOManualManual-missing rxn creatorReaction from orthology templates not found by pantographB471 RS0117705
GLYt2r CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0101195
B471 RS0105160
GSNt2 CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0103450
GSSHtManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
H2OtH2O transport via diffusionManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
H2St CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertise
H2tdHydrogen transportManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
HACD13-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00310
Map01110
Map00280
Map00930
Map01120
Map00650
Map01212
Map00720
Map00623
Map00120
Map00362
Map00062
Map01200
Map01130
Map00071
Map00380
Map00281
HCO3EHCO3 equilibration reactionManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap00910
HCYSMT CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS24115
HDR1ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
HISDr CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0107725
HISTD1 CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0118330
ICDHyrIsocitrate dehydrogenase (NADP)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00480
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Map01210
Map00720
Map01230
Map01200
Map00020
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ICH CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0105245
ILEt2rL isoleucine reversible transport via proton symportManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
INSTt2 CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0106725
B471 RS0111265
B471 RS0115410
B471 RS0103740
B471 RS0110960
B471 RS0106155
B471 RS0110805
INSt2 CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0103450
Kt3r CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0105655
B471 RS0105660
LTHRKL threonine kinaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap00860
MALSMalate synthaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00630
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Map00620
MALTATr CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0114270
MALt2r CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS23035
MAN1PT CUTManualManual-missing rxn creatorReactions originally found with orthology but modified following biological expertiseB471 RS0107610
METt2rL methionine reversible transport via proton symportManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
MN2tManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
MNabcManganese transport via ABC systemManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
MOBDabcMolybdate transport via ABC systemManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
MTAP CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0100890
MTHPTGHMr CUTManualManual-missing rxn creatorReactions originally found with orthology but modified following biological expertiseB471 RS0109820
MTHTHFSs(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran synthesis (spontaneous)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
NADHIManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
NAPRT CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0101045
NAt3 CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0114180
B471 RS0105660
B471 RS0105655
NIabcNickel transport via ABC systemManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
NMNAT CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0119010
NNATr CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0119010
NNDMBRTNicotinate-nucleotide dimethylbenzimidazole phosphoribosyltransferaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00860
O2tO2 transport diffusionManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
OMCDC2-Oxo-4-methyl-3-carboxypentanoate decarboxylationManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map01210
Map00660
Map01110
Map00290
OOR2r CUTManualManual-missing rxn creatorReactions originally found with orthology but modified following biological expertise
ORNTA CUTManualManual-missing rxn creatorReactions originally found with orthology but modified following biological expertiseB471 RS0100915
PAPSR CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0111805
PBUTTPhosphate butyryltransferaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00650
PDX5PO2Pyridoxine 5'-phosphate oxidase (anaerboicManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
PFKPhosphofructokinaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
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Map00051
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PGL CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0108265
PGPP120Phosphatidylglycerol phosphate phosphatase (n-C14:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
PGPP140Phosphatidylglycerol phosphate phosphatase (n-C14:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
PGPP160Phosphatidylglycerol phosphate phosphatase (n-C16:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
PGPP161Phosphatidylglycerol phosphate phosphatase (n-C16:1)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
PGPP180Phosphatidylglycerol phosphate phosphatase (n-C18:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
PGPP181Phosphatidylglycerol phosphate phosphatase (n-C18:1)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
PGSA141 CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0110395
PHETRSPhenylalanyl-tRNA synthetaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap00970
PIMSManualManual-missing rxn creatorReaction from orthology templates not found by pantographB471 RS0105555
PIt7 CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0107600
PMDPHTPyrimidine phosphataseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map01110
Map00740
PRAGSr CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0105240
PRAIi CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0109420
PRAMPCPhosphoribosyl-AMP cyclohydrolaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00340
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PRASCSi CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0105280
PRATPPPhosphoribosyl-ATP pyrophosphataseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00340
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PROt2r CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0105160
B471 RS0101195
B471 RS0105560
B471 RS0114030
PSD120 CUTManualManual-missing rxn creatorReactions originally found with orthology but modified following biological expertise
PSD140Phosphatidylserine decarboxylase (n-C14:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
PSD141Phosphatidylserine decarboxylase (n-C14:1)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
PSD160Phosphatidylserine decarboxylase (n-C16:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
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PSD161Phosphatidylserine decarboxylase (n-C16:1)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
Map01110
PSD180Phosphatidylserine decarboxylase (n-C18:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
Map01110
PSD181Phosphatidylserine decarboxylase (n-C18:1)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
Map01110
PSP LPhosphoserine phosphatase (L-serine)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map01120
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PSSA120 CUTManualManual-missing rxn creatorReactions originally found with orthology but modified following biological expertise
PSSA140Phosphatidylserine syntase (n-C14:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
PSSA141Phosphatidylserine syntase (n-C14:1)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
PSSA160Phosphatidylserine syntase (n-C16:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
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PSSA161Phosphatidylserine syntase (n-C16:1)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
Map01110
Map00260
PSSA180Phosphatidylserine syntase (n-C18:0)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
Map01110
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PSSA181Phosphatidylserine syntase (n-C18:1)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00564
Map01110
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PTPATiPantetheine-phosphate adenylyltransferaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00770
PYDXNKPyridoxine kinaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00750
PYDXNtrPyridoxine transport via diffusionManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
PYRt2Pyruvate transport in via proton symportManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
QOXManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
RIBFLVt2 CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertise
RUBISCOManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
S6PG CUTManualManual-missing rxn creatorReactions originally found with orthology but modified following biological expertiseB471 RS0114170
B471 RS0115875
S7PI CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0115470
SADT CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0113425
SBP CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0116865
SCYSDSSUF Cysteine desulfurationManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
SHCHCC CUTManualManual-missing rxn creatorReaction from orthology templates not found by pantographB471 RS21010
SHCHD2Sirohydrochlorin dehydrogenase (NAD)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
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SLCYSS CUTManualManual-missing rxn creatorReactions originally found with orthology but modified following biological expertiseB471 RS0104440
SLFAT CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0113425
SO4aatManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
SO4tManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
SORManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
SPONT1ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
SQORManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
SQRED1ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
SULR CUTManualManual-missing rxn creatorReactions originally found with orthology but modified following biological expertiseB471 RS20735
B471 RS0114010
StSulfur diffusionManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
T2DECAITrans-2-decenoyl-ACP isomeraseManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
TECAS CLGlycerol techoic acid synthesis (D-ala, n=25)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
THDPSTetrahydrodipicolinate succinylaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
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THMP CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS20160
THMt2Thiamine transport in via proton symportManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
THRAi CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0102175
THRPDC CUTManualManual-missing rxn creatorReactions originally found with orthology but modified following biological expertiseB471 RS21645
THZPSN CUTManualManual-missing rxn creatorReaction from orthology templates not found by pantographB471 RS0117710
B471 RS0111790
B471 RS0117715
TMDSThymidylate synthaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap00240
Map01100
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TMKThiamine kinaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
Map00730
TSQOCManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
TST1ManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
TSULtThiosulfate transport, extracellularManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
TTTONtexManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
UAAGMDtPBP substrate translocatorManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
UACGAMDH CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0102405
B471 RS24525
B471 RS0106500
B471 RS0114265
UACGAMOAT CUTManualManual-missing rxn creatorReaction found from orthology but we fixed reversibility based on biological expertiseB471 RS0114275
UDCPPtexiUndecaprenyl phosphate transport (external to cytoplasm)ManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
UPP3MTUroporphyrinogen methyltransferaseManualManual-reaction to add deleteReaction added from literature evidence or biological expertiseMap01100
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VALt2rL valine reversible transport via proton symportManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
ZN2tManualManual-missing rxn creatorReaction from orthology templates not found by pantograph
ZNabcZinc transport via ABC systemManualManual-reaction to add deleteReaction added from literature evidence or biological expertise
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