Difference between revisions of "TDPGDH"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PGMT PGMT] == * direction: ** REVERSIBLE * common name: ** Phosphoglucomutase * Synonym(s): == Rea...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TDPGDH TDPGDH] == * direction: ** LEFT-TO-RIGHT * common name: ** DTDPglucose 4,6-dehydratase * Syn...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PGMT PGMT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/TDPGDH TDPGDH] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Phosphoglucomutase
+
** DTDPglucose 4,6-dehydratase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[g1p]][c] '''<=>''' 1.0 [[g6p]][c]
+
** 1.0 [[dtdpglu]][c] '''=>''' 1.0 [[dtdp4d6dg]][c] '''+''' 1.0 [[h2o]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 D-Glucose 1-phosphate[c] '''<=>''' 1.0 D-Glucose 6-phosphate[c]
+
** 1.0 DTDPglucose[c] '''=>''' 1.0 DTDP-4-dehydro-6-deoxy-D-glucose[c] '''+''' 1.0 H2O H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0105610]]
+
* Gene: [[B471_RS0104495]]
−
** [[pantograph]]-[[bsubtilis]]
+
** Source: [[orthology-cljungdahlii]]
−
* [[B471_RS0119315]]
+
** Source: [[orthology-aferrooxidans]]
−
** [[pantograph]]-[[cljungdahlii]]
+
 
== Pathways  ==
 
== Pathways  ==
 
* [[map00521]]: [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521]
 
* [[map00521]]: [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521]
Line 24: Line 23:
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''148''' reactions found over '''694''' reactions in the full pathway
 
** '''148''' reactions found over '''694''' reactions in the full pathway
−
* [[map00500]]: [http://www.genome.jp/dbget-bin/www_bget?map00500 map00500]
+
* [[map00523]]: [http://www.genome.jp/dbget-bin/www_bget?map00523 map00523]
−
** '''9''' reactions found over '''81''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
* [[map00525]]: [http://www.genome.jp/dbget-bin/www_bget?map00525 map00525]
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[map00520]]: [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520]
+
* [[map01055]]: [http://www.genome.jp/dbget-bin/www_bget?map01055 map01055]
−
** '''19''' reactions found over '''80''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[cljungdahlii]]
+
*** Tool: [[pantograph]]
−
*** [[bsubtilis]]
+
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* BioCyc : META:PHOSPHOGLUCMUT-RXN
+
* RHEA:
−
* MetaNetX (MNX) Equation : MNXR102548
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17221 17221]
−
* KEGG Reaction : R08639
+
* EC Number : 4.2.1.46
−
* EC Number : 5.4.2.2
+
* MetaNetX (MNX) Equation : MNXR104761
−
{{#set: direction=REVERSIBLE}}
+
* KEGG Reaction : R06513
−
{{#set: common name=Phosphoglucomutase}}
+
* BioCyc : META:DTDPGLUCDEHYDRAT-RXN
−
{{#set: gene associated=B471_RS0105610|B471_RS0119315}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: in pathway=map00521|map01130|map00500|map01110|map00520}}
+
{{#set: common name=DTDPglucose 4,6-dehydratase}}
 +
{{#set: gene associated=B471_RS0104495}}
 +
{{#set: in pathway=map00521|map01130|map00523|map00525|map01055}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=cljungdahlii|bsubtilis}}
 

Latest revision as of 16:47, 21 March 2018

Reaction TDPGDH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • DTDPglucose 4,6-dehydratase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 DTDPglucose[c] => 1.0 DTDP-4-dehydro-6-deoxy-D-glucose[c] + 1.0 H2O H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 4.2.1.46
  • MetaNetX (MNX) Equation : MNXR104761
  • KEGG Reaction : R06513
  • BioCyc : META:DTDPGLUCDEHYDRAT-RXN




Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=TDPGDH&oldid=8372"