Difference between revisions of "VALDHr"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TRDR TRDR] == * direction: ** LEFT-TO-RIGHT * common name: ** Thioredoxin reductase (NADPH) * Synon...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/VALDHr VALDHr] == * direction: ** REVERSIBLE * common name: ** Valine dehydrogenase * Synonym(s):...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/TRDR TRDR] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/VALDHr VALDHr] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** Thioredoxin reductase (NADPH)
+
** Valine dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h]][c] '''+''' 1.0 [[trdox]][c] '''+''' 1.0 [[nadph]][c] '''=>''' 1.0 [[nadp]][c] '''+''' 1.0 [[trdrd]][c]
+
** 1.0 [[val__L]][c] '''+''' 1.0 [[nad]][c] '''+''' 1.0 [[h2o]][c] '''<=>''' 1.0 [[3mob]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[nh4]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H+[c] '''+''' 1.0 Oxidized thioredoxin[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 Reduced thioredoxin[c]
+
** 1.0 L-Valine[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 H2O H2O[c] '''<=>''' 1.0 3-Methyl-2-oxobutanoate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 H+[c] '''+''' 1.0 Ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS0117930]]
+
* Gene: [[B471_RS0101770]]
** [[pantograph]]-[[bsubtilis]]
+
** Source: [[orthology-bsubtilis]]
* [[B471_RS0117870]]
+
** [[pantograph]]-[[cljungdahlii]]
+
** [[pantograph]]-[[bsubtilis]]
+
 
== Pathways  ==
 
== Pathways  ==
* [[map00450]]: [http://www.genome.jp/dbget-bin/www_bget?map00450 map00450]
 
** '''6''' reactions found over '''35''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-bsubtilis]]
*** [[cljungdahlii]]
+
*** Tool: [[pantograph]]
*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
* BioCyc : META:THIOREDOXIN-REDUCT-NADPH-RXN
+
* RHEA:
* MetaNetX (MNX) Equation : MNXR104766
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30763 30763]
* KEGG Reaction : R02016
+
* EC Number : 1.4.1.23
* EC Number : 1.6.4.5
+
* MetaNetX (MNX) Equation : MNXR105183
{{#set: direction=LEFT-TO-RIGHT}}
+
* KEGG Reaction : R01434
{{#set: common name=Thioredoxin reductase (NADPH)}}
+
* BioCyc : META:RXN-13184
{{#set: gene associated=B471_RS0117930|B471_RS0117870}}
+
{{#set: direction=REVERSIBLE}}
{{#set: in pathway=map00450}}
+
{{#set: common name=Valine dehydrogenase}}
 +
{{#set: gene associated=B471_RS0101770}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=cljungdahlii|bsubtilis}}
 

Latest revision as of 16:38, 21 March 2018

Reaction VALDHr

  • direction:
    • REVERSIBLE
  • common name:
    • Valine dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Valine[c] + 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 H2O H2O[c] <=> 1.0 3-Methyl-2-oxobutanoate[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 H+[c] + 1.0 Ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 1.4.1.23
  • MetaNetX (MNX) Equation : MNXR105183
  • KEGG Reaction : R01434
  • BioCyc : META:RXN-13184