Difference between revisions of "XTSNt2"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/prbamp prbamp] == * common name: ** 1-(5-Phosphoribosyl)-AMP * Synonym(s): == Reaction(s) kn...")
 
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680] == * common_name: ** Methane metabolism * Synonym(s): == Reaction(s) found == '''...")
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/prbamp prbamp] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680] ==
−
* common name:
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* common_name:
−
** 1-(5-Phosphoribosyl)-AMP
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** Methane metabolism
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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* [[PRAMPC]]
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'''14''' reactions found over '''75''' reactions in the full pathway
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== Reaction(s) known to produce the compound ==
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* [[ACS]]
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* [[PRATPP]]
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** 3 associated gene(s):
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== Reaction(s) of unknown directionality ==
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*** [[B471_RS0108000]]
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*** [[B471_RS0102585]]
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*** [[B471_RS0101560]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[ALDD1]]
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** 2 associated gene(s):
 +
*** [[B471_RS0115620]]
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*** [[B471_RS0119455]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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* [[ENO]]
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** 1 associated gene(s):
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*** [[B471_RS0119310]]
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** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[FBA]]
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** 2 associated gene(s):
 +
*** [[B471_RS0118210]]
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*** [[B471_RS0101615]]
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** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[FBA2]]
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** 1 associated gene(s):
 +
*** [[B471_RS0101615]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
* [[FBA3]]
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** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-reaction_to_add_delete]]
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* [[FBP]]
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** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-reaction_to_add_delete]]
 +
* [[GHMT2r]]
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** 1 associated gene(s):
 +
*** [[B471_RS0101930]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[MDH]]
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** 1 associated gene(s):
 +
*** [[B471_RS0108660]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[PFK]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-reaction_to_add_delete]]
 +
* [[PGCD]]
 +
** 2 associated gene(s):
 +
*** [[B471_RS0105500]]
 +
*** [[B471_RS0108770]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[PGM]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0119315]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
* [[PSERT]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0105495]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
* [[PSP_L]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-reaction_to_add_delete]]
 +
== Reaction(s) not found ==
 +
* [http://bigg.ucsd.edu/universal/reactions/7MHTS 7MHTS]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACKr ACKr]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACKrh ACKrh]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACKrm ACKrm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACSm ACSm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACSp ACSp]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALCD1 ALCD1]
 +
* [http://bigg.ucsd.edu/universal/reactions/BFBP BFBP]
 +
* [http://bigg.ucsd.edu/universal/reactions/BFBPh BFBPh]
 +
* [http://bigg.ucsd.edu/universal/reactions/CH2ACH CH2ACH]
 +
* [http://bigg.ucsd.edu/universal/reactions/CH3ACH CH3ACH]
 +
* [http://bigg.ucsd.edu/universal/reactions/COBS COBS]
 +
* [http://bigg.ucsd.edu/universal/reactions/DHAK DHAK]
 +
* [http://bigg.ucsd.edu/universal/reactions/DMAMT DMAMT]
 +
* [http://bigg.ucsd.edu/universal/reactions/ENOf ENOf]
 +
* [http://bigg.ucsd.edu/universal/reactions/ENOm ENOm]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBA3hi FBA3hi]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBAf FBAf]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBAh FBAh]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBAm FBAm]
 +
* [http://bigg.ucsd.edu/universal/reactions/FDH FDH]
 +
* [http://bigg.ucsd.edu/universal/reactions/FPGPL FPGPL]
 +
* [http://bigg.ucsd.edu/universal/reactions/GF4GL_0 GF4GL_0]
 +
* [http://bigg.ucsd.edu/universal/reactions/GHMT2rm GHMT2rm]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLYCDH_1 GLYCDH_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLYCK2 GLYCK2]
 +
* [http://bigg.ucsd.edu/universal/reactions/HPYRRx HPYRRx]
 +
* [http://bigg.ucsd.edu/universal/reactions/LPFPLT LPFPLT]
 +
* [http://bigg.ucsd.edu/universal/reactions/LPPGS LPPGS]
 +
* [http://bigg.ucsd.edu/universal/reactions/MCMMT MCMMT]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHf MDHf]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHh MDHh]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHi2 MDHi2]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHm MDHm]
 +
* [http://bigg.ucsd.edu/universal/reactions/MDHp MDHp]
 +
* [http://bigg.ucsd.edu/universal/reactions/OHPBAT OHPBAT]
 +
* [http://bigg.ucsd.edu/universal/reactions/PCPPTh PCPPTh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PCPPTm PCPPTm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PFK_3 PFK_3]
 +
* [http://bigg.ucsd.edu/universal/reactions/PFK_adp PFK_adp]
 +
* [http://bigg.ucsd.edu/universal/reactions/PFKh PFKh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGLYDH PGLYDH]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGMf PGMf]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGMm PGMm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPC PPC]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPS PPS]
 +
* [http://bigg.ucsd.edu/universal/reactions/PSAT PSAT]
 +
* [http://bigg.ucsd.edu/universal/reactions/PSP PSP]
 +
* [http://bigg.ucsd.edu/universal/reactions/PSP_D PSP_D]
 +
* [http://bigg.ucsd.edu/universal/reactions/PSP_Lpp PSP_Lpp]
 +
* [http://bigg.ucsd.edu/universal/reactions/PTA2 PTA2]
 +
* [http://bigg.ucsd.edu/universal/reactions/PTAr PTAr]
 +
* [http://bigg.ucsd.edu/universal/reactions/PTArh PTArh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PTArm PTArm]
 +
* [http://bigg.ucsd.edu/universal/reactions/RH2CD RH2CD]
 +
* [http://bigg.ucsd.edu/universal/reactions/RH3CD RH3CD]
 +
* [http://bigg.ucsd.edu/universal/reactions/SGAT SGAT]
 +
* [http://bigg.ucsd.edu/universal/reactions/SPDC SPDC]
 +
* [http://bigg.ucsd.edu/universal/reactions/SPT_syn SPT_syn]
 +
* [http://bigg.ucsd.edu/universal/reactions/TMAMT TMAMT]
 +
* [http://bigg.ucsd.edu/universal/reactions/TYRCBOX TYRCBOX]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=1-(5-Phosphoribosyl)-AMP}}
+
{{#set: common_name=Methane metabolism}}
−
{{#set: consumed by=PRAMPC}}
+
{{#set: reaction found=14}}
−
{{#set: produced by=PRATPP}}
+
{{#set: total reaction=75}}
 +
{{#set: completion rate=19.0}}

Revision as of 00:49, 21 March 2018

Pathway map00680

  • common_name:
    • Methane metabolism
  • Synonym(s):

Reaction(s) found

14 reactions found over 75 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=XTSNt2&oldid=4371"