Difference between revisions of "TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN"

Latest revision as of 19:05, 25 March 2018

Reaction TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN

• direction:
  • LEFT-TO-RIGHT
• common name:
  • pseudouridine synthase
  • Pseudouridine synthase I, TruA, C-terminal
• ec number:
  • EC-5.4.99.12
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 tRNA-uridine-38-40[c] => 1 tRNA-pseudouridine-38-40[c]
• With common name(s):
  • 1 a uridine38-40 in tRNA[c] => 1 a pseudouridine38-40 in tRNA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: Ec-27_004410
  • Source: annotation-esiliculosus_genome
    • Assignment: EC-NUMBER
• Gene: Ec-07_006750
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-06_009680
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-14_001350
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-08_003150
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-14_001340
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-06_003220
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-20_000700
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-04_001540
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-07_000310
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-27_005240
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-09_003890
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-14_000160
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-14_001540
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-17_003530
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-26_004180
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-06_004490
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-21_005910
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-20_003420
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-01_008790
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-01_000690
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-19_003680
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-22_001870
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-28_003620
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
• Gene: Ec-05_002890
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM

Pathways

Reconstruction information

• Category: manual
  • Source: manual-erythro
  • Source: manual-sphingo361
  • Source: manual-sphingo391
  • Source: manual-roseov420
  • Source: manual-rhizobi
  • Source: manual-hoflea
  • Source: manual-imperaili
  • Source: manual-roseov134
  • Source: manual-marino
  • Source: manual-bosea
• Category: annotation
  • Source: annotation-esiliculosus_genome
    • Tool: pathwaytools

External links

• LIGAND-RXN:
  • R03020
• UNIPROT:
  • Q59069
  • P47428
  • P45291
  • Q45557
  • Q50291
  • P53167
  • Q12211
  • P73295
  • P07649