Difference between revisions of "GDPMANDEHYDRA-RXN"

Latest revision as of 20:24, 25 March 2018

Reaction GDPMANDEHYDRA-RXN

• direction:
  • LEFT-TO-RIGHT
• common name:
  • GDP-mannose 4,6-dehydratase
• ec number:
  • EC-4.2.1.47
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 GDP-MANNOSE[c] => 1 GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE[c] + 1 WATER[c]
• With common name(s):
  • 1 GDP-α-D-mannose[c] => 1 GDP-4-dehydro-6-deoxy-α-D-mannose[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: Ec-11_005510
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
  • Source: orthology-aragem
• Gene: Ec-28_003400
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
  • Source: orthology-aragem

Pathways

• GDPRHAMSYN-PWY, GDP-D-rhamnose biosynthesis: GDPRHAMSYN-PWY
  • 1 reactions found over 2 reactions in the full pathway
• PWY-7573, GDP-mycosamine biosynthesis: PWY-7573
  • 1 reactions found over 3 reactions in the full pathway
• PWY-5740, GDP-L-colitose biosynthesis: PWY-5740
  • 1 reactions found over 5 reactions in the full pathway
• PWY-66, GDP-L-fucose biosynthesis I (from GDP-D-mannose): PWY-66
  • 2 reactions found over 2 reactions in the full pathway
• PWY-5738, GDP-6-deoxy-D-talose biosynthesis: PWY-5738
  • 1 reactions found over 2 reactions in the full pathway
• PWY-5739, GDP-D-perosamine biosynthesis: PWY-5739
  • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-aragem
    • Tool: pantograph
• Category: manual
  • Source: manual-erythro
  • Source: manual-sphingo361
  • Source: manual-sphingo391
  • Source: manual-hoflea
  • Source: manual-imperaili
  • Source: manual-bosea
• Category: annotation
  • Source: annotation-esiliculosus_genome
    • Tool: pathwaytools

External links

• RHEA:
  • 23820
• LIGAND-RXN:
  • R00888
• UNIPROT:
  • Q84439