Gap-filling

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 Common nameEc numberReconstruction categoryReconstruction toolReconstruction sourceReconstruction commentGene associatedIn pathway
2.1.1.17-RXNEC-2.1.1.17Gap-filling
Manual		MenecoManual-erythro
Manual-sphingo361
Manual-hoflea
Manual-rhizobi
Manual-bosea
Gap-filling-gapfilling solution with meneco draft medium		Added for gapfillingPWY-6825
2.3.1.179-RXNEC-2.3.1.179Gap-filling
Manual		MenecoManual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Gap-filling-gapfilling solution with meneco draft medium		Added for gapfillingPWY-5973
3-PHOSPHOGLYCERATE-PHOSPHATASE-RXNEC-3.1.3.38Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
3.1.4.14-RXNEC-3.1.4.14Gap-filling
Manual		MenecoManual-imperaili
Gap-filling-gapfilling solution with meneco draft medium
Manual-marino		Added for gapfillingPWY-6012
4.2.1.61-RXNΒ-hydroxypalmitoyl-acyl carrier protein dehydrase
Β-hydroxypalmitoyl thioester dehydratase
Β-hydroxypalmityl-ACP dehydrase		EC-2.3.1.86
EC-2.3.1.85
EC-4.2.1.59		Gap-filling
Manual		MenecoManual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Gap-filling-gapfilling solution with meneco draft medium		Added for gapfillingPWY-5971
PWY-5994
5.3.3.14-RXNEC-5.3.3.14Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfillingPWY0-862
CYCLOHEXADIENYL-DEHYDROGENASE-RXNEC-1.3.1.43Gap-filling
Manual		MenecoManual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Gap-filling-gapfilling solution with meneco draft medium		Added for gapfillingPWY-6120
CYSPH-RXNEC-2.5.1Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfillingPWY-702
CYSTATHIONASE-RXNGap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
DIHYDRODIPICSYN-RXNDihydropicolinate synthetase
Dihydrodipicolinic acid synthase		EC-4.3.3.7Gap-filling
Manual		MenecoManual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Gap-filling-gapfilling solution with meneco draft medium		Added for gapfillingPWY-5097
PWY-2942
DAPLYSINESYN-PWY
PWY-2941
DIHYDROFOLATEREDUCT-RXN-THF/NADP//DIHYDROFOLATE/NADPH/PROTON.37.Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
FATTY-ACID-SYNTHASE-RXNEC-2.3.1.85Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
FATTY-ACYL-COA-SYNTHASE-RXNEC-2.3.1.86Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfillingPWY-5970
FESO3OXI-RXNGap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfillingFESULFOX-PWY
GCVMULTI-RXN-GLY/THF/NAD//METHYLENE-THF/AMMONIUM/CARBON-DIOXIDE/NADH.56.Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
GLYCEROL-DEHYDROGENASE-NADP+-RXNEC-1.1.1.372
EC-1.1.1.72		Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
GLYCOLALD-DEHYDROG-RXNEC-1.2.1.21Gap-filling
Manual		MenecoGap-filling-gapfilling solution with meneco draft medium
Manual-rhizobi		Added for gapfillingPWY0-1280
DARABCATK12-PWY
GLYCOLATE-REDUCTASE-RXNEC-1.1.1.26Gap-filling
Manual		MenecoManual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-roseov134
Manual-bosea
Gap-filling-gapfilling solution with meneco draft medium		Added for gapfillingPWY-7295
PWY-7294
GLYOHMETRANS-RXN-SER/THF//GLY/METHYLENE-THF/WATER.33.Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
GLYOXYLATE-REDUCTASE-NADP+-RXNEC-1.1.1.79Gap-filling
Manual		MenecoManual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-roseov134
Manual-bosea
Gap-filling-gapfilling solution with meneco draft medium		Added for gapfilling
H2NEOPTERINALDOL-RXNEC-4.1.2.25Gap-filling
Manual		MenecoManual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Gap-filling-gapfilling solution with meneco draft medium		Added for gapfillingPWY-7539
PWY-6148
PWY-6797
PWY-6147
HISTIDPHOS-RXNEC-3.1.3.15Gap-filling
Manual		MenecoManual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Gap-filling-gapfilling solution with meneco draft medium		Added for gapfillingHISTSYN-PWY
HOMOCYSMETB12-RXN-HOMO-CYS/5-METHYL-THF//MET/THF.31.Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
HOMSUCTRAN-RXNEC-2.3.1.46Gap-filling
Manual		MenecoManual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Gap-filling-gapfilling solution with meneco draft medium		Added for gapfillingHOMOSER-METSYN-PWY
L-AMINO-ACID-DEHYDROGENASE-RXN-TYR/NAD/WATER//P-HYDROXY-PHENYLPYRUVATE/AMMONIUM/NADH/PROTON.61.Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
LINOLEOYL-RXNEC-3.1.2Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfillingPWY-6917
MANNITOL-1-PHOSPHATASE-RXNEC-3.1.3.22Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfillingPWY-3881
PWY-6531
ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN-L-ORNITHINE/P-HYDROXY-PHENYLPYRUVATE//TYR/L-GLUTAMATE GAMMA-SEMIALDEHYDE.73.Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
PANTEPADENYLYLTRAN-RXNEC-2.7.7.3Gap-filling
Manual		MenecoManual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Gap-filling-gapfilling solution with meneco draft medium		Added for gapfillingCOA-PWY-1
COA-PWY
PHOSPHOGLYCERATE-PHOSPHATASE-RXNEC-3.1.3.20Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
PREPHENATE-ASP-TRANSAMINE-RXNEC-2.6.1.78Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
PREPHENATE-DEHYDROGENASE-NADP+-RXNEC-1.3.1.13Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
PREPHENATEDEHYDROG-RXNEC-1.3.1.12Gap-filling
Manual		MenecoManual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-roseov420
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Gap-filling-gapfilling solution with meneco draft medium		Added for gapfillingPWY-7303
TYRSYN
R15-RXN-MET/P-HYDROXY-PHENYLPYRUVATE//CPD-479/TYR.42.Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
RXN-10656EC-4.2.1.59Gap-filling
Manual		MenecoManual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Gap-filling-gapfilling solution with meneco draft medium		Added for gapfillingPWY-6282
RXN-10660EC-4.2.1.59Gap-filling
Manual		MenecoManual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-roseov420
Manual-rhizobi
Manual-hoflea
Manual-imperaili
Manual-roseov134
Manual-marino
Manual-bosea
Gap-filling-gapfilling solution with meneco draft medium		Added for gapfillingPWY-6282
RXN-10662EC-3.1.2Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
RXN-10727Myristoyl-ACP hydrolase activity
Tetradecanoyl-ACP hydrolase activity		EC-3.1.2.14Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
RXN-10811Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
RXN-13295EC-2.3.1.199Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfillingPWY-7036
RXN-13299EC-1.1.1.330Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfillingPWY-7036
RXN-13303EC-4.2.1.134Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfillingPWY-7036
RXN-13307EC-1.3.1.93Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfillingPWY-7036
RXN-13406EC-2.1.1.162Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
RXN-13431EC-2.3.1Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfillingPWY-7050
RXN-13435EC-3.1.2.2Gap-filling
Manual		MenecoManual-erythro
Manual-sphingo361
Manual-sphingo391
Manual-hoflea
Manual-rhizobi
Manual-marino
Manual-bosea
Gap-filling-gapfilling solution with meneco draft medium		Added for gapfilling
RXN-14476EC-1.3.1.79Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfilling
RXN-14642EC-1.2.1Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfillingPWY-7295
PWY-7294
RXN-15200Phenylpyruvate aminotransferaseEC-2.6.1Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfillingPWY-7432
RXN-16016EC-2.3.1Gap-fillingMenecoGap-filling-gapfilling solution with meneco draft mediumAdded for gapfillingPWY-7583
... further results
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