RXN-12263
From metabolic_network
Revision as of 20:24, 25 March 2018 by Dyliss (Talk | contribs) (Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12263 RXN-12263] == * direction: ** LEFT-TO-RIGHT * common name: ** Isopentenyl-diphosphate del...")
Contents
Reaction RXN-12263
- direction:
- LEFT-TO-RIGHT
- common name:
- Isopentenyl-diphosphate delta-isomerase type 1 fused to squalene synthase; probably two separate ORFs
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 FARNESYL-PP[c] => 1 PPI[c] + 1 CPD-465[c]
- With common name(s):
- 2 (2E,6E)-farnesyl diphosphate[c] => 1 diphosphate[c] + 1 presqualene diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-11_001030
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: orthology-aragem
- Source: annotation-esiliculosus_genome
Pathways
- PWY-7072, hopanoid biosynthesis (bacteria): PWY-7072
- 1 reactions found over 14 reactions in the full pathway
- PWY-6105, botryococcenes and methylated squalene biosynthesis: PWY-6105
- 2 reactions found over 9 reactions in the full pathway
- PWY-6767, 4,4'-diapolycopenedioate biosynthesis: PWY-6767
- 1 reactions found over 9 reactions in the full pathway
- PWY-5875, staphyloxanthin biosynthesis: PWY-5875
- 1 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-aragem
- Tool: pantograph
- Source: orthology-aragem
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
- LIGAND-RXN:
- UNIPROT:
